Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0735
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016420-6|AAB65311.3| 530|Caenorhabditis elegans Udp-glucurono... 28 3.0
Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z78064-3|CAB01512.1| 157|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 27 7.0
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 27 7.0
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 27 7.0
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 27 7.0
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 27 7.0
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 27 7.0
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 27 7.0
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 27 7.0
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 27 7.0
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 26 9.2
>AF016420-6|AAB65311.3| 530|Caenorhabditis elegans
Udp-glucuronosyltransferase protein7 protein.
Length = 530
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 291 LLLKSHLAAWFAWWLSFSICSIR 223
LL+ L+A F +W+++ ICS+R
Sbjct: 502 LLILFMLSALFVYWITYVICSVR 524
>Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical
protein F41E7.6 protein.
Length = 557
Score = 27.5 bits (58), Expect = 4.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -1
Query: 373 LCSGLIDTRITSELRDFCFLTNSLNESTVVEISFGSLVC 257
L +G + +I+ RDF FL++ N + +FG+ C
Sbjct: 344 LLTGSVSQKISEAERDFYFLSSKTNVNVYHYTNFGATYC 382
>Z78064-3|CAB01512.1| 157|Caenorhabditis elegans Hypothetical
protein F57B1.5 protein.
Length = 157
Score = 26.6 bits (56), Expect = 7.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 15 WVGSEFWSWYSNYSNRVWTIGSHW 86
W+ S FW+W Y+N S W
Sbjct: 118 WIFSAFWAWRETYNNVSNLFISEW 141
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 414 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 452
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 628 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 666
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 764 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 802
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 813 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 851
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 813 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 851
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 813 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 851
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 805 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 843
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 816 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 854
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 26.6 bits (56), Expect = 7.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 249 ATKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKP 365
ATK + +T SF +FV+K+K E +++ +P
Sbjct: 817 ATKTASSTPQSPSTTTSFDDFVEKEKKTVLETIKILDRP 855
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/45 (28%), Positives = 28/45 (62%)
Frame = +3
Query: 267 LPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKPLHKVAGEAAVLT 401
LP+ +S T+D FK+ +K+K L + ++ ++ + K+A ++T
Sbjct: 1086 LPDVMSKTLDHFKKIDEKRKELDQKANKL-VEFIMKMANPNMLIT 1129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,742,156
Number of Sequences: 27780
Number of extensions: 144135
Number of successful extensions: 428
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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