Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0733
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.4  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.6  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.6  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
 Frame = +2

Query: 281 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTM-TN---SPKSQ 448
           DQ   PS R   +  +N   S+P    PT P   +LK+   +  P   + TN   S K Q
Sbjct: 415 DQRSTPSPRVYGNVNENQDCSTPTENSPTKPYY-KLKTANNKRPPSTELGTNIYTSSKRQ 473

Query: 449 RLT--LTPKTS 475
           R +  L+P +S
Sbjct: 474 RTSPQLSPMSS 484


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 652 CWIVYTKIY 626
           CWI+Y +IY
Sbjct: 58  CWIIYVRIY 66


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 505 SPPKVRSPLSYEIAENILDRPSPLTSRSL 591
           +PP   +PLS++  E+ L+  S +T+ +L
Sbjct: 32  NPPPEDTPLSFKNIESHLNAISQITNSTL 60


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 458 LTPKTSQETPKIRHTPVH 511
           +TP   QE P + H P++
Sbjct: 250 VTPGPKQELPDLNHKPLN 267


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 458 LTPKTSQETPKIRHTPVH 511
           +TP   QE P + H P++
Sbjct: 142 VTPGPKQELPDLNHKPLN 159


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 485 PKIRHTPVHPK*DHRYH 535
           P +   P+HP    RYH
Sbjct: 150 PFVTQCPIHPGMTFRYH 166


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 12/56 (21%), Positives = 25/56 (44%)
 Frame = +2

Query: 329 NSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIR 496
           +S  S  +   P +P+I+  K P   ++ L    ++  S    +    + ET K++
Sbjct: 66  SSTSSGSLGQFPATPVIDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKTSETSKLQ 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,022
Number of Sequences: 336
Number of extensions: 3649
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)