Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0733
(694 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g54060.1 68416.m05977 hypothetical protein mucin MUC3, Homo s... 31 0.55
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.3
At4g32790.1 68417.m04665 exostosin family protein contains Pfam ... 30 1.7
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 30 1.7
At1g25886.1 68414.m03180 Ulp1 protease family protein contains P... 30 1.7
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 29 2.9
At4g09060.1 68417.m01493 expressed protein 29 2.9
At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664... 29 3.9
At1g74160.1 68414.m08589 expressed protein 29 3.9
At5g47070.1 68418.m05800 protein kinase, putative similar to pro... 28 5.1
At5g44970.1 68418.m05515 hypothetical protein contains a novel d... 28 5.1
At5g24220.1 68418.m02850 lipase class 3-related 28 5.1
At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR... 28 5.1
At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR... 28 5.1
At2g35670.1 68415.m04375 transcription factor, putative / fertil... 28 5.1
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 6.8
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 28 6.8
At3g18890.1 68416.m02399 expressed protein similar to UV-B and o... 28 6.8
At2g12900.1 68415.m01408 hypothetical protein similar to transcr... 28 6.8
At1g51140.1 68414.m05749 basic helix-loop-helix (bHLH) family pr... 28 6.8
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 28 6.8
At1g63550.1 68414.m07184 hypothetical protein low similarity to ... 27 8.9
At1g51170.1 68414.m05754 protein kinase family protein 27 8.9
At1g41860.1 68414.m04834 hypothetical protein 27 8.9
>At3g54060.1 68416.m05977 hypothetical protein mucin MUC3, Homo
sapiens, EMBL:AF007193
Length = 456
Score = 31.5 bits (68), Expect = 0.55
Identities = 20/87 (22%), Positives = 42/87 (48%)
Frame = +1
Query: 280 RPKSWPLEAQDPLRHTKLYTQLTN*LQTYFTSDRKIKVTRDQKLTSKNHDKLTKIPEINS 459
R ++ L + P+R+ + + ++ S +K KV+ DQ+ + +K+ ++ +
Sbjct: 44 RSEASSLISDSPIRNVPNSLMTLDAMLNHYVSLKKQKVSLDQEKLKLDQEKI-RVQNLLQ 102
Query: 460 HSENFTRNTKNQTYASPPKVRSPLSYE 540
EN NT N + +PP +P S +
Sbjct: 103 GMEN-VMNTYNASLTAPPPASAPTSQQ 128
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 281 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQR-LT 457
++SP P + + + S+P KP SP E K+ + + P SPK +
Sbjct: 438 EESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKP 497
Query: 458 LTPKTSQETPKIRHTPVHP 514
PK E+PK + P
Sbjct: 498 EQPKPKPESPKQESSKQEP 516
>At4g32790.1 68417.m04665 exostosin family protein contains Pfam
domain, PF03016: Exostosin family
Length = 593
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 295 PLEAQDPLRHTKLYTQLTN*LQTYFTSDRKIKV 393
PL DPL HT LY L+ ++Y ++K+KV
Sbjct: 237 PLIENDPLLHTPLYWNLSMFKRSYELMEKKLKV 269
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 475 TRNTKNQTYASPPKVRSPLSYEIAENILDRPSPLTSRSLRGTLKIKEVLEDRSWYKRSN 651
T + N+ P+ RSP + ++ L+ P+P+ SR +K+ L D +W ++++
Sbjct: 614 TEGSGNKLIVKLPRGRSP-AQSVSGGSLEDPAPVNSRVSSPVHTVKQELCDNNWREKNH 671
>At1g25886.1 68414.m03180 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At4g08880, At1g34730, At1g27790, At1g34740,
At1g27780, At5g36850, At3g42730, At1g52020, At3g24390,
At4g05280, At4g03300
Length = 1201
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 394 TRDQKLTSKNHDKLTKIPEINSHSENFTR-NTKNQTYASPPKVRSPLSYEI 543
T D S DK T IP+ N S+N K + +SP KV+ L YE+
Sbjct: 818 TEDPNPGSDEADK-TDIPKNNDESDNAAAVEAKEEKKSSPKKVKKQLVYEL 867
>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 681
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 373 SDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTY 501
S RK K+ R+ +L S+ DKL + + + +TR + Y
Sbjct: 37 SPRKTKLQREVELKSRGGDKLQPVSDAGGEATTYTRLPPREDY 79
>At4g09060.1 68417.m01493 expressed protein
Length = 341
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 305 RRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMT--NSPKSQRLTLTP 466
R++L Q+ + S+ N S + KSP+T +SP++ +SP+ R L+P
Sbjct: 273 RKLLRQQQSPLCSADKNRNSASAKSNKRKSPKTMSSPVEKRLEFSSPEISRKPLSP 328
>At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664:
Protein of unknown function (DUF810)
Length = 985
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 343 LTN*LQTYFTSDRKIKVTRDQKLTSKNHDKLTKIPEI-NSHSE 468
LTN ++ Y T RKI+ + L+ K DK P+I N+HSE
Sbjct: 189 LTNSVEAYPTHRRKIEKSSRLMLSLKRKDKPHLQPQISNTHSE 231
>At1g74160.1 68414.m08589 expressed protein
Length = 1030
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 299 SKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQR 451
S+ R+ S N + SPI + L+E+ P + P+ ++T K +R
Sbjct: 472 SRTRVQSSSSNQVYQSPIVIMKPAKLVEKAGIPASSLIPIHSLTGIKKIRR 522
>At5g47070.1 68418.m05800 protein kinase, putative similar to
protein kinase [Lophopyrum elongatum]
gi|13022177|gb|AAK11674
Length = 410
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 201 NNATKRKQEEAFSHNYKKRCTPTRLASTKVLAPRSAGSSQTYKTLYSAHQ 350
NN KRK +E ++ + + +S + PRS S ++ K LY+ +
Sbjct: 19 NNKNKRKGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTERE 68
>At5g44970.1 68418.m05515 hypothetical protein contains a novel
domain with similarity to F-box domain;
Length = 389
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 368 SPLIERLKSPETRNSPLKTMTNSP 439
SP++++LK P +SP+ TMTN P
Sbjct: 344 SPILKKLK-PSFTDSPMSTMTNLP 366
>At5g24220.1 68418.m02850 lipase class 3-related
Length = 376
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 14 FIPFILVDN*TILDCYDNGLVILVF*IRIKTLCQN 118
F F LV+ T++D YD+ + VF ++ LCQN
Sbjct: 79 FFNFSLVE--TLIDDYDSSIYGAVFEYKLSNLCQN 111
>At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 364 YFTSDRKIKVTRDQKLTSKNHDKLTKIPEIN 456
Y R + +TRD+KL KN D +P +N
Sbjct: 317 YRQGSRIVIITRDKKLLQKNADATYVVPRLN 347
>At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 364 YFTSDRKIKVTRDQKLTSKNHDKLTKIPEIN 456
Y R + +TRD+KL KN D +P +N
Sbjct: 317 YRQGSRIVIITRDKKLLQKNADATYVVPRLN 347
>At2g35670.1 68415.m04375 transcription factor, putative /
fertilization-independent seed 2 protein (FIS2)
identical to GB:AF096095
Length = 632
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 412 TSKNHDKLTKIPEINSHSENFTRNTKNQTYASPPKVRSPLSYEIAENILDRPSPLTSRSL 591
T N D ++ P+ +S +N + + ++ + PP+ RS S E ++ IL P
Sbjct: 206 THVNEDNISSPPKAHSSKKNESTHMNDEDVSFPPRTRS--SKETSD-ILTTTQPAIVEP- 261
Query: 592 RGTLKIKEVLEDRSWY-KRSNKENCEPMMAET 684
K++ V + Y KR +P +AE+
Sbjct: 262 -SEPKVRRVSRRKQLYAKRYKARETQPAIAES 292
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 341 SSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETP 487
SSP P +P +SP +SP + +P Q L P S+ TP
Sbjct: 283 SSPAQ-SPATPSPMTPQSPSPVSSPSPDQSAAPSDQSTPLAPSPSETTP 330
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Frame = +1
Query: 394 TRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTYASPPKVRSPL-SYEIAENILDRPS 570
T D S DK T IP+ N S+N T + S PK + + ++ N LD
Sbjct: 712 TEDPNPGSDEADK-TDIPKNNDESDNATAVEAKEEKKSSPKTEVVIRAGNVSYNPLDMVD 770
Query: 571 PLTSRSLRGTLKIKEVLEDRSWYKRSNKE 657
PL +K V+ +++ E
Sbjct: 771 PLKVEEFSNIIKGPSVIHTLFGFRKVPNE 799
>At3g18890.1 68416.m02399 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 641
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +2
Query: 296 PSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTS 475
PSKR + + S+ + + PT P+ + +P+ +P K P+ L+P S
Sbjct: 327 PSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKEDEAPPKEKNVKPR----PLSPYAS 382
Query: 476 QETPKIRHTPV 508
E K +P+
Sbjct: 383 YEDLKPPTSPI 393
>At2g12900.1 68415.m01408 hypothetical protein similar to
transcription factor(bZIP family) VSF-1 GI:3425907 from
[Lycopersicon esculentum]
Length = 264
Score = 27.9 bits (59), Expect = 6.8
Identities = 28/97 (28%), Positives = 46/97 (47%)
Frame = +1
Query: 367 FTSDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTYASPPKVRSPLSYEIA 546
+T D K+ + KL ++ K TK+ EI S + R KN+ A+ K R L Y I
Sbjct: 87 YTDDELNKIAKSTKL--QDIAKSTKLQEIVSDPKKVRRILKNRELAASSKQRK-LKYMI- 142
Query: 547 ENILDRPSPLTSRSLRGTLKIKEVLEDRSWYKRSNKE 657
++ R L +++ KIK + +D++ KE
Sbjct: 143 -DLEHRIKFLENKNALIFEKIKLLEKDKTILMNEKKE 178
>At1g51140.1 68414.m05749 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 379
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 451 INSHSENFTRNTKNQTYASPPKVRSPLSYEIAENILDRP-SPLTSRSLRGTLKIKEVLED 627
++ H RN+ Y S P E E LDRP SP T R L G L+ + ++
Sbjct: 12 LHDHQHQRPRNSGLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFLQTTDTSDN 71
>At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:433663
from (Arabidopsis thaliana)
Length = 1520
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +2
Query: 380 ERLKSPETRNSPLK--TMTNSPKSQRLTLTPKTS--QETPK 490
E++ S E+ N L+ T+T SP ++ L L PKT+ Q TP+
Sbjct: 1032 EKVFSLESENKVLRQQTLTISPTTRALALRPKTTIIQRTPE 1072
>At1g63550.1 68414.m07184 hypothetical protein low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 299
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 308 RILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETP 487
+ L Q S+L SP P SP +SP ++SP ++ +P S L TP + P
Sbjct: 213 KCLLRFQTSVLLSP----PPSPSAPPPRSPPPKSSPPSSLPQTP-SPPLVFTPPQNVPNP 267
>At1g51170.1 68414.m05754 protein kinase family protein
Length = 404
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 338 LSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKI 493
LS +N KPT P L PE +P ++++ KS R+ K ++ ++
Sbjct: 174 LSCSLN-KPTRPEFYHLSDPEPDPNPESNLSHNKKSLRIFRQKKKKTKSARV 224
>At1g41860.1 68414.m04834 hypothetical protein
Length = 178
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 415 SKNHDKLTKIPEINSHSENFTRNTKNQTYASPPKVRSPLSYE-IAENILDRPSPL 576
+K+ + K+ NFTR N +Y +PP + + E + E IL S L
Sbjct: 51 TKSKELRNKLTAFTQGRNNFTRTYGNSSYQTPPPLTAESKIESMLEQILKGQSKL 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,722,813
Number of Sequences: 28952
Number of extensions: 309456
Number of successful extensions: 1086
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1477286152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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