Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0730
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   5.8  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   5.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   5.8  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   5.8  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   5.8  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   5.8  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   5.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   5.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +3

Query: 141 HHAKTAVTRLVVGTGKHHIAKPRHAH 218
           HH +T++   V G   HH+      H
Sbjct: 135 HHHQTSLLGKVEGAATHHLGSVYSRH 160


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 227 QDRHPAPHQARHFSQ 271
           Q++HP  HQ  H  Q
Sbjct: 172 QEQHPQHHQPHHQQQ 186


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 167 SRNRRFGMMLGQGMDVQSAQEK 102
           +R+RR+   LGQ + +Q+  E+
Sbjct: 226 ARSRRYTTELGQVLGLQTTDER 247


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 167 SRNRRFGMMLGQGMDVQSAQEK 102
           +R+RR+   LGQ + +Q+  E+
Sbjct: 226 ARSRRYTTELGQVLGLQTTDER 247


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 167 SRNRRFGMMLGQGMDVQSAQEK 102
           +R+RR+   LGQ + +Q+  E+
Sbjct: 226 ARSRRYTTELGQVLGLQTTDER 247


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 167 SRNRRFGMMLGQGMDVQSAQEK 102
           +R+RR+   LGQ + +Q+  E+
Sbjct: 226 ARSRRYTTELGQVLGLQTTDER 247


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -1

Query: 167 SRNRRFGMMLGQGMDVQSAQEK 102
           +R+RR+   LGQ + +Q+  E+
Sbjct: 225 ARSRRYTTELGQVLGLQTTDER 246


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 311 FWCECAYGADHPWA 270
           FW   A GA HP A
Sbjct: 36  FWLAAASGAPHPAA 49


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 227 QDRHPAPHQARHFSQ 271
           Q++HP  HQ  H  Q
Sbjct: 174 QEQHPQHHQPHHQQQ 188


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 311 FWCECAYGADHPWA 270
           FW   A GA HP A
Sbjct: 36  FWLAAASGAPHPAA 49


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 119 VHPCPDRASCQNGG 160
           ++ C D A CQNGG
Sbjct: 185 INEC-DSAPCQNGG 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,058
Number of Sequences: 336
Number of extensions: 3101
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)