Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0730
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.44 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.44 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   0.77 
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   4.1  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   4.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   7.2  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   7.2  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   7.2  
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    22   9.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    22   9.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    22   9.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    22   9.5  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
 Frame = +3

Query: 180 TGKHHIAKPRHAH------KGGRIGTQRRTKL----DISASPRVISAVRAFAPKPIP 320
           TG HH  +P  +H      +  R   +RR  L    DIS SPR+ S+  + +  P+P
Sbjct: 194 TGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSPRLCSSNGSSSATPLP 250


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 26.6 bits (56), Expect = 0.44
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
 Frame = +3

Query: 180 TGKHHIAKPRHAH------KGGRIGTQRRTKL----DISASPRVISAVRAFAPKPIP 320
           TG HH  +P  +H      +  R   +RR  L    DIS SPR+ S+  + +  P+P
Sbjct: 194 TGLHHYYQPSPSHPQPIVPQPQRASLERRDSLFRPYDISKSPRLCSSNGSSSATPLP 250


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 0.77
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 210 HAHKGGRIGTQRRTKLDISASPRVISAVRAFAPK 311
           H   GG +  + + K+DI A+PR+ +   A+ PK
Sbjct: 674 HKPGGGNVKIETK-KIDIKAAPRIEAKNDAYIPK 706



 Score = 23.4 bits (48), Expect = 4.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 239 PAPHQARHFSQPTGDQRRTRIRTKTDTVGGG 331
           P   +   +++P GD + +R  +  D +GGG
Sbjct: 313 PQGMRPNFYNRPMGDPQTSRPPSGNDNMGGG 343


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 447 CACKAIKLGNARVFPVTTL*NDGQ*IVI 364
           C   ++ LGN   FP T L N G   VI
Sbjct: 88  CIALSVGLGNVWRFPFTALENGGGAFVI 115


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 447 CACKAIKLGNARVFPVTTL*NDGQ*IVI 364
           C   ++ LGN   FP T L N G   VI
Sbjct: 88  CIALSVGLGNVWRFPFTALENGGGAFVI 115


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +3

Query: 165 RLVVGTGKHHIAKPRHAHKGGRIGTQRRTKLDISASPRVISAVR 296
           RL++     H+ +P       R    RR +  +SA  RV+ A R
Sbjct: 565 RLILNRLNEHLEEPSSPRLSDRQFGFRRGRSTVSAIQRVVEAGR 608


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 74  CGSLPPPDQSSPARFVHPCPDRASC 148
           C S  PPD +  A   H C +   C
Sbjct: 14  CYSCEPPDCADTAIHAHYCQNAIQC 38


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +3

Query: 69  RIAVAFHHLTNLLLRALYIHALTEHHAKTAVTRLVVGTGKHH 194
           R+  AF     +LL  LY+    +  A+ A    +   G HH
Sbjct: 246 RLVHAFCEAAPMLLLQLYVLVTLQSEAQLAAALKLKTLGHHH 287


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 141 ARSGHGCTKRAGEDWSGGGRLPQYERS 61
           AR+  G  ++ G+D +G GR+  ++ +
Sbjct: 103 ARTVQGYMRKFGQDCNGDGRIDCFDHA 129


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
 Frame = +3

Query: 180 TGKHHIAKPR-HAHKGGRIGTQRRTKLDISAS--PRVISAVRAFAPKPI 317
           TG HH+A P  H H     G         SAS  P    A RA    PI
Sbjct: 709 TGGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPATRASPSSPI 757


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +2

Query: 128 CPDRASCQNGGYATGCRYR*APYRQAPPC 214
           CP + +C      T CR+   P    P C
Sbjct: 36  CPGKTTCSQCIQTTNCRWCTMPNFTHPRC 64


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 272 PTGDQRRTRIRTKTDTVGGGARYPIRPIVSR 364
           P+G        T T  +    R+PI+ I+SR
Sbjct: 39  PSGVNNWVSDSTGTAAIWASGRFPIQQIISR 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 590,254
Number of Sequences: 2352
Number of extensions: 13979
Number of successful extensions: 34
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)