Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0730
(473 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101021-1|AAI01022.2| 292|Homo sapiens thrombospondin, type I,... 37 0.031
DQ494466-1|ABF69917.1| 1765|Homo sapiens T calcium channel alpha... 33 0.38
DQ494462-1|ABF69913.1| 1776|Homo sapiens T calcium channel alpha... 33 0.38
DQ494458-1|ABF69909.1| 1758|Homo sapiens T calcium channel alpha... 33 0.38
DQ494452-1|ABF69903.1| 1753|Homo sapiens T calcium channel alpha... 33 0.38
DQ494449-1|ABF69900.1| 1735|Homo sapiens T calcium channel alpha... 33 0.38
D42047-1|BAA07648.1| 411|Homo sapiens KIAA0089 protein. 33 0.51
BC028726-1|AAH28726.1| 351|Homo sapiens glycerol-3-phosphate de... 33 0.51
BC006168-1|AAH06168.1| 259|Homo sapiens GPD1L protein protein. 33 0.51
L34041-1|AAA92863.1| 349|Homo sapiens L-glycerol-3-phosphate:NA... 30 4.7
BC077721-1|AAH77721.1| 1030|Homo sapiens ARHGEF18 protein protein. 30 4.7
BC032234-1|AAH32234.1| 349|Homo sapiens glycerol-3-phosphate de... 30 4.7
BC114497-1|AAI14498.1| 267|Homo sapiens DOK1 protein protein. 29 6.2
AK125999-1|BAC86386.1| 1014|Homo sapiens protein ( Homo sapiens ... 29 8.2
AK123426-1|BAC85614.1| 198|Homo sapiens protein ( Homo sapiens ... 29 8.2
>BC101021-1|AAI01022.2| 292|Homo sapiens thrombospondin, type I,
domain containing 3 protein.
Length = 292
Score = 37.1 bits (82), Expect = 0.031
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -2
Query: 364 TTHYRANWVPGPPSHGIGFGANARTALITRGLAEMSSLVRRWVPIL-PPLWAWRGLAIWC 188
T R + VPG P+ G A++R G M++L R VP+ PP+ A R W
Sbjct: 210 TMSLRRSGVPGLPAVGTAALASSRGL----GPVAMAALPPRPVPVTCPPVLALRTRTPWA 265
Query: 187 LPVPTTSRVTAVLA*CSVRAW 125
PV + S A+L C ++ W
Sbjct: 266 SPVRSGSSWPAMLRTCMIKMW 286
>DQ494466-1|ABF69917.1| 1765|Homo sapiens T calcium channel alpha 1G
subunit variant 209 protein.
Length = 1765
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 298 ARTALITRGLAEMSSLVRRWVPILPPLWAWRGLAIWCLPVPTTSRVTAVLA*CSVRAW 125
AR + + M +L+ + LP LWAW L W + T R AV+ AW
Sbjct: 1706 ARVLKLLKMAVGMRALLDTVMQALPQLWAWSSLETWSVTRHTPVRAWAVMPPFGTLAW 1763
>DQ494462-1|ABF69913.1| 1776|Homo sapiens T calcium channel alpha 1G
subunit variant 177 protein.
Length = 1776
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 298 ARTALITRGLAEMSSLVRRWVPILPPLWAWRGLAIWCLPVPTTSRVTAVLA*CSVRAW 125
AR + + M +L+ + LP LWAW L W + T R AV+ AW
Sbjct: 1717 ARVLKLLKMAVGMRALLDTVMQALPQLWAWSSLETWSVTRHTPVRAWAVMPPFGTLAW 1774
>DQ494458-1|ABF69909.1| 1758|Homo sapiens T calcium channel alpha 1G
subunit variant 145 protein.
Length = 1758
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 298 ARTALITRGLAEMSSLVRRWVPILPPLWAWRGLAIWCLPVPTTSRVTAVLA*CSVRAW 125
AR + + M +L+ + LP LWAW L W + T R AV+ AW
Sbjct: 1699 ARVLKLLKMAVGMRALLDTVMQALPQLWAWSSLETWSVTRHTPVRAWAVMPPFGTLAW 1756
>DQ494452-1|ABF69903.1| 1753|Homo sapiens T calcium channel alpha 1G
subunit variant 49 protein.
Length = 1753
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 298 ARTALITRGLAEMSSLVRRWVPILPPLWAWRGLAIWCLPVPTTSRVTAVLA*CSVRAW 125
AR + + M +L+ + LP LWAW L W + T R AV+ AW
Sbjct: 1694 ARVLKLLKMAVGMRALLDTVMQALPQLWAWSSLETWSVTRHTPVRAWAVMPPFGTLAW 1751
>DQ494449-1|ABF69900.1| 1735|Homo sapiens T calcium channel alpha 1G
subunit variant 17 protein.
Length = 1735
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 298 ARTALITRGLAEMSSLVRRWVPILPPLWAWRGLAIWCLPVPTTSRVTAVLA*CSVRAW 125
AR + + M +L+ + LP LWAW L W + T R AV+ AW
Sbjct: 1676 ARVLKLLKMAVGMRALLDTVMQALPQLWAWSSLETWSVTRHTPVRAWAVMPPFGTLAW 1733
>D42047-1|BAA07648.1| 411|Homo sapiens KIAA0089 protein.
Length = 411
Score = 33.1 bits (72), Expect = 0.51
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = -1
Query: 227 ATFMGMAGLGDMVLTCTDNQSRNRRFGMMLGQ-GMDVQSAQEKI--GQVVEGYRNTKEVR 57
ATF+ G+ D++ TC RNRR + G ++ ++++ GQ ++G + + EV
Sbjct: 312 ATFLESCGVADLITTCYG--GRNRRVAEAFARTGKTIEELEKEMLNGQKLQGPQTSAEVY 369
Query: 56 ELAHRFGV--EMPITEEIYQ 3
+ + G+ + P+ +YQ
Sbjct: 370 RILKQKGLLDKFPLFTAVYQ 389
>BC028726-1|AAH28726.1| 351|Homo sapiens glycerol-3-phosphate
dehydrogenase 1-like protein.
Length = 351
Score = 33.1 bits (72), Expect = 0.51
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = -1
Query: 227 ATFMGMAGLGDMVLTCTDNQSRNRRFGMMLGQ-GMDVQSAQEKI--GQVVEGYRNTKEVR 57
ATF+ G+ D++ TC RNRR + G ++ ++++ GQ ++G + + EV
Sbjct: 252 ATFLESCGVADLITTCYG--GRNRRVAEAFARTGKTIEELEKEMLNGQKLQGPQTSAEVY 309
Query: 56 ELAHRFGV--EMPITEEIYQ 3
+ + G+ + P+ +YQ
Sbjct: 310 RILKQKGLLDKFPLFTAVYQ 329
>BC006168-1|AAH06168.1| 259|Homo sapiens GPD1L protein protein.
Length = 259
Score = 33.1 bits (72), Expect = 0.51
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = -1
Query: 227 ATFMGMAGLGDMVLTCTDNQSRNRRFGMMLGQ-GMDVQSAQEKI--GQVVEGYRNTKEVR 57
ATF+ G+ D++ TC RNRR + G ++ ++++ GQ ++G + + EV
Sbjct: 160 ATFLESCGVADLITTCYG--GRNRRVAEAFARTGKTIEELEKEMLNGQKLQGPQTSAEVY 217
Query: 56 ELAHRFGV--EMPITEEIYQ 3
+ + G+ + P+ +YQ
Sbjct: 218 RILKQKGLLDKFPLFTAVYQ 237
>L34041-1|AAA92863.1| 349|Homo sapiens L-glycerol-3-phosphate:NAD
oxidoreductase protein.
Length = 349
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = -1
Query: 227 ATFMGMAGLGDMVLTCTDNQSRNRRFGMMLGQ-GMDVQSAQEKI--GQVVEGYRNTKEVR 57
ATF+ G+ D++ TC RNR+ + G ++ ++++ GQ ++G +E+
Sbjct: 250 ATFLESCGVADLITTCYG--GRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELY 307
Query: 56 ELAHRFGV--EMPITEEIYQ 3
+ G+ + P+ +Y+
Sbjct: 308 SILQHKGLVDKFPLFMAVYK 327
>BC077721-1|AAH77721.1| 1030|Homo sapiens ARHGEF18 protein protein.
Length = 1030
Score = 29.9 bits (64), Expect = 4.7
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +2
Query: 35 RRSDAPVRGLLSYCGSLPPPDQSSPARFVHPCPDRASCQNGGYATGCR-YR*APYRQAP- 208
RRS +P+ L PPPD PA P P A + G++ P AP
Sbjct: 941 RRSLSPI--LPGRHSPAPPPDPGFPA----PSPPPADSPSEGFSLKAGGTALLPGPPAPS 994
Query: 209 PCP*RWQDRHPAPHQAR-HF 265
P P RW+ +H +P R HF
Sbjct: 995 PLPARWRRQHLSPESGRIHF 1014
>BC032234-1|AAH32234.1| 349|Homo sapiens glycerol-3-phosphate
dehydrogenase 1 (soluble) protein.
Length = 349
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Frame = -1
Query: 227 ATFMGMAGLGDMVLTCTDNQSRNRRFGMMLGQ-GMDVQSAQEKI--GQVVEGYRNTKEVR 57
ATF+ G+ D++ TC RNR+ + G ++ ++++ GQ ++G +E+
Sbjct: 250 ATFLESCGVADLITTCYG--GRNRKVAEAFARTGKSIEQLEKELLNGQKLQGPETARELY 307
Query: 56 ELAHRFGV--EMPITEEIYQ 3
+ G+ + P+ +Y+
Sbjct: 308 SILQHKGLVDKFPLFMAVYK 327
>BC114497-1|AAI14498.1| 267|Homo sapiens DOK1 protein protein.
Length = 267
Score = 29.5 bits (63), Expect = 6.2
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = -1
Query: 257 ELGAALGADPATFMGMAGLGDMVLTCTDNQSRNRRFGMMLGQGMDVQSAQEKIGQVVEG 81
E G + + P TF G+ + + ++ GQG DV A G+V EG
Sbjct: 5 EAGRSCPSGPGTFTFQTAQGNDIFQAVETAIHRQKAQGKAGQGHDVLRADSHEGEVAEG 63
>AK125999-1|BAC86386.1| 1014|Homo sapiens protein ( Homo sapiens
cDNA FLJ44011 fis, clone TESTI4024420, highly similar
to Rattus norvegicus presynaptic cytomatrix protein
(Pclo). ).
Length = 1014
Score = 29.1 bits (62), Expect = 8.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 192 HIAKPRHAHKGGRIGTQRRTKLDISASPRVISAVRAFAPK--PIPWEGG 332
HI+ P +KGG +G Q D + SP+ +SA K P P E G
Sbjct: 69 HISAPEKTYKGGSLGCQTEADSD-TQSPQYLSATSPPKDKKRPTPLEIG 116
>AK123426-1|BAC85614.1| 198|Homo sapiens protein ( Homo sapiens
cDNA FLJ41432 fis, clone BRHIP2006800. ).
Length = 198
Score = 29.1 bits (62), Expect = 8.2
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = -3
Query: 330 PPPTXXXXXXXXXXXXSPVGWLKCRAWCGAGCRSCHLYGHGGAWRYGAYLYRQPVA*PPF 151
PPPT GW A G CR +G G W G P+A PP
Sbjct: 53 PPPTSLAHLSVVPQEGPQCGWRVPSAGRGGQCRHQASWGERGPWVGG------PLAAPPS 106
Query: 150 WHDARSG 130
+AR G
Sbjct: 107 LTEARRG 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,400,879
Number of Sequences: 237096
Number of extensions: 2145769
Number of successful extensions: 5607
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5603
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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