Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0728
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   4.9  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   6.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.6  

>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 521 FFGAYFLSIGKVSEQCIVHRLWRDCKWLSK 610
           FFG +F+          +HR  RD K+ ++
Sbjct: 8   FFGVFFIIFSDFVNGKTLHRSTRDDKYTTR 37


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 20  EVFQNCFNKIANKQQGELENAYRGSTRV 103
           +VF NC+N  A++ Q     AY    RV
Sbjct: 109 DVFWNCWNGEASRYQCSPGLAYDREARV 136


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 20  EVFQNCFNKIANKQQGELENAYRGSTRV 103
           +VF NC+N  A++ Q     AY    RV
Sbjct: 109 DVFWNCWNGEASRYQCSPGLAYDREARV 136


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 241 DNGVVLFLNVYHRLFNY 291
           D     FLN Y  LFN+
Sbjct: 344 DKYTTYFLNTYPHLFNF 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,875
Number of Sequences: 336
Number of extensions: 3343
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)