Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0728
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.6  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   8.1  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   8.1  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 222 FKSNYQKCSFFATQEWHNTQ 163
           FK +YQK    A   +HNT+
Sbjct: 280 FKKDYQKVQHLALHAFHNTE 299


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 573 CTVYGGIVNGYRRRFYVQV 629
           CTV+GG V+ YR  F  ++
Sbjct: 330 CTVHGGPVDEYRLPFEAEL 348


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 519 LILVTLFCDVIQRIFLYIYYLITSLQRE 436
           L LV  FC+    + L +Y L+T LQ E
Sbjct: 245 LRLVHAFCEAAPMLLLQLYVLVT-LQSE 271


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,626
Number of Sequences: 2352
Number of extensions: 12612
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)