Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0728
         (633 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC151209-1|AAI51210.1| 1493|Homo sapiens TUBGCP6 protein protein.      30   7.8  
AL022328-10|CAI42756.1| 1819|Homo sapiens tubulin, gamma complex...    30   7.8  
AF272887-1|AAK82968.1| 1819|Homo sapiens gamma-tubulin complex c...    30   7.8  
AB051456-1|BAB33339.1| 1405|Homo sapiens KIAA1669 protein protein.     30   7.8  

>BC151209-1|AAI51210.1| 1493|Homo sapiens TUBGCP6 protein protein.
          Length = 1493

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 2   EPMHLYEVFQNCFNKIANKQQGELENAYRGSTRVPRTDSVVQVKCSIVKNVKSVCV 169
           E  +L E  ++ F+K     QGEL+    G  + P+   V+  +C +VK+V +V +
Sbjct: 308 EEPYLTEAGRDAFDKFCRLHQGELQLLAGGVLQAPQ--PVLVKECELVKDVLNVLI 361


>AL022328-10|CAI42756.1| 1819|Homo sapiens tubulin, gamma complex
           associated protein 6 protein.
          Length = 1819

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 2   EPMHLYEVFQNCFNKIANKQQGELENAYRGSTRVPRTDSVVQVKCSIVKNVKSVCV 169
           E  +L E  ++ F+K     QGEL+    G  + P+   V+  +C +VK+V +V +
Sbjct: 308 EEPYLTEAGRDAFDKFCRLHQGELQLLAGGVLQAPQ--PVLVKECELVKDVLNVLI 361


>AF272887-1|AAK82968.1| 1819|Homo sapiens gamma-tubulin complex
           component protein.
          Length = 1819

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 2   EPMHLYEVFQNCFNKIANKQQGELENAYRGSTRVPRTDSVVQVKCSIVKNVKSVCV 169
           E  +L E  ++ F+K     QGEL+    G  + P+   V+  +C +VK+V +V +
Sbjct: 308 EEPYLTEAGRDAFDKFCRLHQGELQLLAGGVLQAPQ--PVLVKECELVKDVLNVLI 361


>AB051456-1|BAB33339.1| 1405|Homo sapiens KIAA1669 protein protein.
          Length = 1405

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 2   EPMHLYEVFQNCFNKIANKQQGELENAYRGSTRVPRTDSVVQVKCSIVKNVKSVCV 169
           E  +L E  ++ F+K     QGEL+    G  + P+   V+  +C +VK+V +V +
Sbjct: 276 EEPYLTEAGRDAFDKFCRLHQGELQLLAGGVLQAPQ--PVLVKECELVKDVLNVLI 329


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,533,987
Number of Sequences: 237096
Number of extensions: 1714178
Number of successful extensions: 3275
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3275
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)