Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0728
         (633 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y00221-1|CAA68368.1|  710|Drosophila melanogaster protein ( Dros...    51   1e-06
J03148-1|AAA28442.1|  710|Drosophila melanogaster protein ( D.me...    51   1e-06
BT003251-1|AAO25008.1|  744|Drosophila melanogaster LD29371p pro...    51   1e-06
AE014134-1863|AAF52934.2|  710|Drosophila melanogaster CG5102-PA...    51   1e-06

>Y00221-1|CAA68368.1|  710|Drosophila melanogaster protein (
          Drosophila mRNA forthe sex determining gene
          daughterless. ).
          Length = 710

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/30 (76%), Positives = 23/30 (76%)
 Frame = +2

Query: 2  EPMHLYEVFQNCFNKIANKQQGELENAYRG 91
          EPMHLYEVFQNCFNKIANKQ      A RG
Sbjct: 7  EPMHLYEVFQNCFNKIANKQPTGTVGADRG 36


>J03148-1|AAA28442.1|  710|Drosophila melanogaster protein (
          D.melanogaster daughterlessprotein (da) mRNA, complete
          cds. ).
          Length = 710

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/30 (76%), Positives = 23/30 (76%)
 Frame = +2

Query: 2  EPMHLYEVFQNCFNKIANKQQGELENAYRG 91
          EPMHLYEVFQNCFNKIANKQ      A RG
Sbjct: 7  EPMHLYEVFQNCFNKIANKQPTGTVGADRG 36


>BT003251-1|AAO25008.1|  744|Drosophila melanogaster LD29371p
          protein.
          Length = 744

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/30 (76%), Positives = 23/30 (76%)
 Frame = +2

Query: 2  EPMHLYEVFQNCFNKIANKQQGELENAYRG 91
          EPMHLYEVFQNCFNKIANKQ      A RG
Sbjct: 7  EPMHLYEVFQNCFNKIANKQPTGTVGADRG 36


>AE014134-1863|AAF52934.2|  710|Drosophila melanogaster CG5102-PA
          protein.
          Length = 710

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 23/30 (76%), Positives = 23/30 (76%)
 Frame = +2

Query: 2  EPMHLYEVFQNCFNKIANKQQGELENAYRG 91
          EPMHLYEVFQNCFNKIANKQ      A RG
Sbjct: 7  EPMHLYEVFQNCFNKIANKQPTGTVGADRG 36


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,148,685
Number of Sequences: 53049
Number of extensions: 547291
Number of successful extensions: 1192
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)