Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0728
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78546-7|CAB01772.1| 375|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL023830-4|CAA19474.1| 375|Caenorhabditis elegans Hypothetical ... 29 3.7
Z78540-3|CAB01735.2| 482|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical p... 27 8.4
Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical p... 27 8.4
Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical p... 27 8.4
Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical p... 27 8.4
Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical p... 27 8.4
AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor tyro... 27 8.4
AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor tyro... 27 8.4
AJ002903-1|CAA05738.1| 53|Caenorhabditis elegans protein tyros... 27 8.4
>Z78546-7|CAB01772.1| 375|Caenorhabditis elegans Hypothetical
protein T21H8.4 protein.
Length = 375
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 537 KYAPKNLILVTLFCDVIQRIFLYIYYLITS 448
K +P +L+L T FC I+ FL+ + L+T+
Sbjct: 83 KPSPCDLLLKTYFCSKIRGTFLFAFCLVTT 112
>AL023830-4|CAA19474.1| 375|Caenorhabditis elegans Hypothetical
protein T21H8.4 protein.
Length = 375
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 537 KYAPKNLILVTLFCDVIQRIFLYIYYLITS 448
K +P +L+L T FC I+ FL+ + L+T+
Sbjct: 83 KPSPCDLLLKTYFCSKIRGTFLFAFCLVTT 112
>Z78540-3|CAB01735.2| 482|Caenorhabditis elegans Hypothetical
protein C33G3.5 protein.
Length = 482
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 609 FDSHLQSRHKRCTIHCSDTLPIDKK 535
F HL HK T+ SDTL ++KK
Sbjct: 196 FGRHLLDSHKNGTLSTSDTLELNKK 220
>Z47808-12|CAB61003.1| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 485 CITSQNNVTKMRFFGAYFLSIGKVSEQCIVHRLWRDCKWLSKKVL 619
C+ K+ FG S G + ++HR W +W+SK+ +
Sbjct: 706 CLVGDTRTIKIADFGLMRTSYGSDYYK-MLHRSWMPVRWMSKEAI 749
>Z47808-11|CAD36487.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 485 CITSQNNVTKMRFFGAYFLSIGKVSEQCIVHRLWRDCKWLSKKVL 619
C+ K+ FG S G + ++HR W +W+SK+ +
Sbjct: 732 CLVGDTRTIKIADFGLMRTSYGSDYYK-MLHRSWMPVRWMSKEAI 775
>Z35595-13|CAA84639.2| 902|Caenorhabditis elegans Hypothetical
protein C01G6.8b protein.
Length = 902
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 485 CITSQNNVTKMRFFGAYFLSIGKVSEQCIVHRLWRDCKWLSKKVL 619
C+ K+ FG S G + ++HR W +W+SK+ +
Sbjct: 706 CLVGDTRTIKIADFGLMRTSYGSDYYK-MLHRSWMPVRWMSKEAI 749
>Z35595-12|CAD36478.1| 928|Caenorhabditis elegans Hypothetical
protein C01G6.8a protein.
Length = 928
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 485 CITSQNNVTKMRFFGAYFLSIGKVSEQCIVHRLWRDCKWLSKKVL 619
C+ K+ FG S G + ++HR W +W+SK+ +
Sbjct: 732 CLVGDTRTIKIADFGLMRTSYGSDYYK-MLHRSWMPVRWMSKEAI 775
>Z35595-11|CAJ34992.1| 769|Caenorhabditis elegans Hypothetical
protein C01G6.8c protein.
Length = 769
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 485 CITSQNNVTKMRFFGAYFLSIGKVSEQCIVHRLWRDCKWLSKKVL 619
C+ K+ FG S G + ++HR W +W+SK+ +
Sbjct: 573 CLVGDTRTIKIADFGLMRTSYGSDYYK-MLHRSWMPVRWMSKEAI 616
>AJ132947-1|CAC29085.1| 902|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 902
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 485 CITSQNNVTKMRFFGAYFLSIGKVSEQCIVHRLWRDCKWLSKKVL 619
C+ K+ FG S G + ++HR W +W+SK+ +
Sbjct: 706 CLVGDTRTIKIADFGLMRTSYGSDYYK-MLHRSWMPVRWMSKEAI 749
>AJ132946-1|CAC29084.1| 928|Caenorhabditis elegans receptor
tyrosine kinase protein.
Length = 928
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 485 CITSQNNVTKMRFFGAYFLSIGKVSEQCIVHRLWRDCKWLSKKVL 619
C+ K+ FG S G + ++HR W +W+SK+ +
Sbjct: 732 CLVGDTRTIKIADFGLMRTSYGSDYYK-MLHRSWMPVRWMSKEAI 775
>AJ002903-1|CAA05738.1| 53|Caenorhabditis elegans protein tyrosine
kinase protein.
Length = 53
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 485 CITSQNNVTKMRFFGAYFLSIGKVSEQCIVHRLWRDCKWLSKKVL 619
C+ K+ FG S G + ++HR W +W+SK+ +
Sbjct: 1 CLVGDTRTIKIADFGLMRTSYGSDYYK-MLHRSWMPVRWMSKEAI 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,711,563
Number of Sequences: 27780
Number of extensions: 313594
Number of successful extensions: 798
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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