Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0728
(633 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 27 0.20
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 3.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 9.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.9
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 26.6 bits (56), Expect = 0.20
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 271 YHRLFNYSRNMYS*KKAYKGYVL 339
Y+ +NY+ N Y+ K YK Y++
Sbjct: 100 YNNKYNYNNNNYNKKLYYKNYII 122
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = -1
Query: 492 VIQRIFLYIYYLITS 448
VI R+ LYI++L+T+
Sbjct: 477 VIDRLQLYIFFLVTT 491
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 265 NVYHRLFNYSRNMYS*KKAYKGYVL 339
N Y+ N + N Y+ K YK Y++
Sbjct: 328 NNYNNYNNNNYNNYNKKLYYKNYII 352
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 265 NVYHRLFNYSRNMYS*KKAYKGYVL 339
N + + Y+ N Y+ K YK Y++
Sbjct: 323 NYNNNNYKYNYNNYNKKLYYKNYII 347
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 72 ERERSKEPKIISNNNSLSN 90
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 305 ERERSKEPKIISNNNSLSN 323
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 444 QRERRRQSK*IHFNNSVSH 388
+RER ++ K I NNS+S+
Sbjct: 305 ERERSKEPKIISNNNSLSN 323
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,807
Number of Sequences: 438
Number of extensions: 3792
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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