Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0726
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     25   0.50 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    25   0.50 
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           25   0.50 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 24  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 137
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 24  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 137
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 24  SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 137
           SG HLQ    RL+      Q+D + G+   ++  ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/37 (18%), Positives = 19/37 (51%)
 Frame = +1

Query: 376 STLHRRLLSSWASNALVKSSKLAKMSPILRWATKWWL 486
           S +H++   ++ +N       LAK+   + + T +++
Sbjct: 101 SFMHKKSFKNFVNNVAALDETLAKLGQYINYETDYYV 137


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 434 LDFTSAFEAQDERSLRWRVDGALTNYQILEV*AAGFHAN 318
           + F+S    +  RSL     GALT + ++     G H N
Sbjct: 353 IKFSSFGMLKISRSLLTSFGGALTTFLVILFQYGGIHGN 391


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 499 GTRGRATTWSPTLKLVTFSPTCS 431
           GT+  + TW  +L+     PT S
Sbjct: 265 GTQFISNTWQNSLRAADIQPTLS 287


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 232  AVVLTGFGVSRPLRYSKNLSRPLVRAR 312
            ++ L G+  S+  +YS+ ++ P  RAR
Sbjct: 1472 SLALGGWNDSQGDKYSRLVNNPAARAR 1498


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 126 EDPDRKWCY*NTARGNARKIYR 191
           ++PD KW   ++++   R  YR
Sbjct: 223 DEPDHKWKKNDSSKKKTRYYYR 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,624
Number of Sequences: 336
Number of extensions: 1894
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)