Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0724
         (599 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   1.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   3.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.9  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 209 KEALSPIPSLGQHTLPSTSAY 271
           K A  P+P LG H LP  S +
Sbjct: 35  KSAPYPVPGLGLHGLPVDSLH 55


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 175 PPHLLRQYLADQGGAQPHTISRPTHIAQ 258
           PPH   Q   +  G  PH I+ P  + Q
Sbjct: 738 PPHPHHQPPRNPVGTNPHDINNPLSVNQ 765


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 175 PPHLLRQYLADQGGAQPHTISRPTHIAQ 258
           PPH   Q   +  G  PH I+ P  + Q
Sbjct: 630 PPHPHHQPPRNPVGTNPHDINNPLSVNQ 657


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 175 GYLLRVVVAALGIDVA 128
           GYLL V VAA+  D A
Sbjct: 168 GYLLTVAVAAIPTDAA 183


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 450  FDVNDDQYTNYQNRKEQR 503
            FD+   Q  NY+ +K QR
Sbjct: 1193 FDIQLKQVVNYKKKKFQR 1210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,866
Number of Sequences: 336
Number of extensions: 1945
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)