Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0724
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    34   0.004
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    23   10.0 
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    23   10.0 

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 33.9 bits (74), Expect = 0.004
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 483 QNRKEQRDGXXXXXXXXXXXXDGFIRTVTYTADPKEGF 596
           ++++E RDG            DG  RTV YTADP  GF
Sbjct: 38  KSQQESRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGF 75


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 224 PIPSLGQHTLPSTSAYPL 277
           P+P  GQHT+ + + Y L
Sbjct: 8   PLPLRGQHTMATVNLYYL 25


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 224 PIPSLGQHTLPSTSAYPL 277
           P+P  GQHT+ + + Y L
Sbjct: 8   PLPLRGQHTMATVNLYYL 25


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,497
Number of Sequences: 2352
Number of extensions: 7671
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)