Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0723
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.9  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 175 LLLI*YDAYNWVRASDILLF*QY 107
           +LL+ +DAY W+ +  + +F  Y
Sbjct: 125 VLLLLFDAYLWISSVGVRMFQYY 147


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 16/74 (21%), Positives = 32/74 (43%)
 Frame = +2

Query: 386 SVANTDPSKSSASQNLPQDRKRDSLRKSGEKLSGVCLRVNLSSRL*IIRKSFLRIFLQSL 565
           S  NT+P  S A  NLP ++ ++         +   ++ N+ S +    ++F+  F    
Sbjct: 64  SNTNTEPLLSEALTNLPGEKWKEMRATLSPAFTSSKIK-NMYSLISECAENFVDFFQGRE 122

Query: 566 ANESTNEIFCSLNN 607
            +    E+F   +N
Sbjct: 123 QDVEIKEVFSRFSN 136


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 171 SKPRVNILEKNNHIKKESCANPNSHS 248
           SKPRV   E  N I++    NP+  S
Sbjct: 108 SKPRVATPEVENRIEQYKRENPSIFS 133


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 401 DPSKSSASQNLPQDRKRDSLR 463
           DP K SA +N P  +K   +R
Sbjct: 516 DPEKISAIRNFPVPQKTKHVR 536


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 5/21 (23%), Positives = 14/21 (66%)
 Frame = +2

Query: 101 QRILSKQ*NVRCTNPIICIIL 163
           +RI+  +  V C +P++ +++
Sbjct: 184 ERIIEAEKRVECNDPLVALVV 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,627
Number of Sequences: 336
Number of extensions: 3110
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)