Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0672
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF324750-1|AAN75749.1|  563|Drosophila melanogaster N-acetylgala...    29   4.4  
AE014296-2565|AAS64999.1|  563|Drosophila melanogaster CG7304-PB...    29   4.4  
AE014296-2564|AAF49589.2|  635|Drosophila melanogaster CG7304-PA...    29   4.4  

>AF324750-1|AAN75749.1|  563|Drosophila melanogaster
           N-acetylgalactosaminyltransferase protein.
          Length = 563

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 291 FDSIYEKNTDDTKCLRIKSQFPIFLVMC-TFNAKRR 395
           +DS+  +   +TKCL    +  IFL +C   N K+R
Sbjct: 510 YDSVSNQLMSNTKCLEFTDELNIFLAICDAANGKQR 545


>AE014296-2565|AAS64999.1|  563|Drosophila melanogaster CG7304-PB,
           isoform B protein.
          Length = 563

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 291 FDSIYEKNTDDTKCLRIKSQFPIFLVMC-TFNAKRR 395
           +DS+  +   +TKCL    +  IFL +C   N K+R
Sbjct: 510 YDSVSNQLMSNTKCLEFTDELNIFLAICDAANGKQR 545


>AE014296-2564|AAF49589.2|  635|Drosophila melanogaster CG7304-PA,
           isoform A protein.
          Length = 635

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 291 FDSIYEKNTDDTKCLRIKSQFPIFLVMC-TFNAKRR 395
           +DS+  +   +TKCL    +  IFL +C   N K+R
Sbjct: 582 YDSVSNQLMSNTKCLEFTDELNIFLAICDAANGKQR 617


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,487,495
Number of Sequences: 53049
Number of extensions: 271870
Number of successful extensions: 350
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 350
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)