Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0671
         (477 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    28   0.051
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.47 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.83 
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    23   1.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   4.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   5.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 27.9 bits (59), Expect = 0.051
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +1

Query: 262 VLVIAVIAPTSDSTTVRRRLRKPXXXXXXXXXXXXXXTDQVLSTSVNRPKIHGHP 426
           +LV+ ++  +S     RRRLR+P               DQ +S+SVNR ++   P
Sbjct: 17  LLVVLLVHISSSERVTRRRLRRP----LKTTQSVSVTKDQDVSSSVNRFRLRSRP 67


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.6 bits (51), Expect = 0.47
 Identities = 9/63 (14%), Positives = 28/63 (44%)
 Frame = +3

Query: 60  WCSICDYNFFVLIVYYIFFRAIIL*TTVLTVRYCVCGAVTIWVKFYGYYRDCREICGHRY 239
           W ++C  N  ++ +++ F    +    V  ++Y   G + +W + +  +     +   + 
Sbjct: 57  WLNVCCLNLSIVTIFFNFATKKLEQFIVRFMKYHFFGTLKLWSQLFSTFAGIEVLHVVKQ 116

Query: 240 CFN 248
           C++
Sbjct: 117 CYH 119


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 0.83
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +3

Query: 15  RTNTYTQIRIQKFLNWCSICDYNFFVLIVYY 107
           +T   T ++  K+ N+  +   + FV++VYY
Sbjct: 309 KTGRKTVLKTNKYCNFIILFYLSVFVILVYY 339


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +3

Query: 303 NCPQKTPEAIKSVH--IGFVQR 362
           +CPQ TP+ +K +   + FVQ+
Sbjct: 76  SCPQCTPQEMKQIQKVLAFVQK 97


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = +3

Query: 144 LTVRYCVCGAV 176
           L++ YC+CG +
Sbjct: 43  LSINYCICGYI 53


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 402 VHAS*ENLICGSRDVGRNRCGHF*WLPES-SADSC 301
           +HA+ + +IC     G  R G+  ++PE  + D C
Sbjct: 18  IHAATDKVICYYASWGAQRPGNGQFVPEDINPDLC 52


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 305 LSAEDSGSHQKCP 343
           LS+++   HQKCP
Sbjct: 26  LSSDEELFHQKCP 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,715
Number of Sequences: 336
Number of extensions: 2001
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)