Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0670
         (461 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical pr...    30   0.70 
Z92804-4|CAB07251.1|  335|Caenorhabditis elegans Hypothetical pr...    30   0.93 
Z83239-4|CAB05808.1|  336|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr...    27   6.5  
AF016665-2|AAC71181.1|  662|Caenorhabditis elegans Hypothetical ...    27   6.5  
Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U50135-6|AAN63429.1|  925|Caenorhabditis elegans Hypothetical
           protein C52E12.1 protein.
          Length = 925

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = +3

Query: 279 DKKRQQASSQSRITVSNKLKLNELIG*IEDNNSHPQVFPKHYS-ISFFKQSLW*ILNNK 452
           D  R++A  Q+R+  ++K K NE+    E   + P   P H+S I   + S W + N+K
Sbjct: 681 DWARKKAEIQARVAAASKDKSNEVDSDSEPEPARPITPPVHHSNIEKSESSEWTMANSK 739


>Z92804-4|CAB07251.1|  335|Caenorhabditis elegans Hypothetical
           protein K05D4.6 protein.
          Length = 335

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = -1

Query: 458 LLLVVKYSPQALFEEGYAIVFGKHLW--MGVIVFYL 357
           LL++V  +  A+FE  + I+F  H W   G + FYL
Sbjct: 102 LLMMVAVATTAIFENRFYIMFADHTWWSWGRVFFYL 137


>Z83239-4|CAB05808.1|  336|Caenorhabditis elegans Hypothetical
           protein T09F5.8 protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -1

Query: 458 LLLVVKYSPQALFEEGYAIVFGKHLW--MGVIVFYL 357
           LL++V  S  ++FE  + I+F ++ W   G IVFY+
Sbjct: 101 LLMMVAVSTISIFENRFYILFAEYTWWRYGRIVFYI 136


>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
            F12F6.6 protein.
          Length = 1126

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +3

Query: 249  LHVIALFMINDKKRQQASSQSRITVSNKLKLNELIG*IEDNNSHPQVFPKHYSIS 413
            L ++ L++ +  K    S  S +TV +K+   ELI  +   N  P ++P+   IS
Sbjct: 930  LKLMPLYVNSILKNDAISGGSEMTVDDKVWQMELIRGLRTENVMPLIYPRVMPIS 984


>AF016665-2|AAC71181.1|  662|Caenorhabditis elegans Hypothetical
           protein C49D10.8 protein.
          Length = 662

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = -1

Query: 245 MLLLITRNFIFIIQLAGFTAERDTCLCMLIVHLVLIRYWKL 123
           +L+L++ N + ++ + G T   D    + ++H  +  YWKL
Sbjct: 274 LLMLVSSNNV-LLSVKGLTYIGDISYSLYLIHWPIYAYWKL 313


>Z81476-1|CAB03921.2|  431|Caenorhabditis elegans Hypothetical
           protein C25F9.1 protein.
          Length = 431

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -3

Query: 177 HMFMYVNCSFSVD*VLETKTFMLPSILKCDDKVSQLCCMIYLASTTYWLGSGS 19
           + F Y   ++ V  VL  K +  P   KC DK+   C  I+      ++GS S
Sbjct: 381 YRFCYACSTYGV--VLGHKIYCKPVCRKCGDKLGWRCVGIFCERCKTFVGSSS 431


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,086,523
Number of Sequences: 27780
Number of extensions: 191398
Number of successful extensions: 379
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)