Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0668
(384 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871 33 0.059
04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888 31 0.41
03_02_0198 + 6344952-6347483 31 0.41
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 29 0.95
01_06_1038 - 33997124-33997177,33997256-33997318,33997456-339975... 29 0.95
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 29 1.3
06_03_1282 - 28946363-28946533,28947234-28947272,28947399-289475... 28 2.2
02_05_1033 + 33642479-33642688,33643089-33643343,33643479-336436... 28 2.2
02_04_0413 + 22681957-22682035,22682253-22682788 28 2.2
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 28 2.2
01_05_0214 - 19362812-19363477 28 2.2
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 28 2.9
04_03_0799 - 19805190-19805749,19806316-19806403 28 2.9
04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966 27 3.8
03_05_1002 - 29594462-29594581,29594686-29594781,29594857-295949... 27 3.8
03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427 27 3.8
11_01_0730 - 6037375-6037509,6037892-6038019,6038339-6038423,603... 27 5.1
09_04_0379 - 17094540-17094868,17095354-17095717 27 5.1
07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758 27 5.1
06_01_1013 - 7931756-7935109 27 5.1
04_04_1677 + 35306232-35306328,35306697-35307248,35307324-353076... 27 5.1
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 27 5.1
10_01_0197 + 2148109-2149551 27 6.7
09_04_0464 + 17820164-17820181,17820972-17821065,17821251-178214... 27 6.7
08_02_1098 - 24291138-24291851,24292607-24292861 27 6.7
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 27 6.7
01_06_0146 + 26969011-26969995,26970878-26970930 27 6.7
12_01_0584 - 4762476-4762613,4763986-4764075,4765048-4765146,476... 26 8.9
03_02_0123 + 5745390-5745576,5745993-5746082,5746255-5746351,574... 26 8.9
>01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871
Length = 177
Score = 33.5 bits (73), Expect = 0.059
Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 8/48 (16%)
Frame = +3
Query: 135 PRCQARCCYPCSLP------RGPCSVPGRPSC-LP-RGPCSVPGRPSC 254
P C C PCS P RG C P P C LP PC +P P C
Sbjct: 107 PGCPCSCSTPCSFPPIGCHDRGICPPPCPPPCPLPCPPPCPLPCPPPC 154
Score = 31.1 bits (67), Expect = 0.31
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +3
Query: 141 CQARCCYPCSLP-RGPCSVPGRPSCLPRG 224
C C PC LP PC +P P C PRG
Sbjct: 130 CPPPCPPPCPLPCPPPCPLPCPPPCPPRG 158
>04_03_0800 - 19820886-19821421,19822476-19822563,19822871-19822888
Length = 213
Score = 30.7 bits (66), Expect = 0.41
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +3
Query: 108 HCAP*PASAPRCQARC-CYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSC 254
HC P P P C C C G C+ P P C G CS+ +C
Sbjct: 120 HCCPEPPPPPPKPKPCECTYCGGHGGGCNKPAVPPC--AGGCSISDGGAC 167
>03_02_0198 + 6344952-6347483
Length = 843
Score = 30.7 bits (66), Expect = 0.41
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +3
Query: 165 CSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQN 308
CSLP C V G SC P G CS P C + S+E +N
Sbjct: 296 CSLPHDACDVYG--SCGPFGVCSNATNPECRCPAGFEPRSSEEWRLEN 341
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 29.5 bits (63), Expect = 0.95
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 189 SVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQ 305
SVPG+PS + P S+ GRP SP +S + Q
Sbjct: 352 SVPGQPSTILSAPPSLLGRPMTPSASPFPQTSQSPTAFQ 390
>01_06_1038 -
33997124-33997177,33997256-33997318,33997456-33997506,
33998100-33998257,33998406-33998491,33998674-33999527
Length = 421
Score = 29.5 bits (63), Expect = 0.95
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 225 PCSVPGRPSCYHTSPLRYSSAESVSSQNIVRHDQPQTIQYAAPVAKLAVSCSR 383
P S G +SP++ ++A + ++ N V D+PQ + + ++A S +R
Sbjct: 167 PASSEGSAKISPSSPVKAAAAAADTNGNAVAADRPQEVAVNIEITEMAASTAR 219
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 174 PRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVS 299
P P P PS P P PG P+ TSP ++ S S
Sbjct: 1566 PTSPSYSPASPSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYS 1607
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVS 299
P P P PG P+ P P P PS TSP ++ S S
Sbjct: 1576 PSYSPTSPSYTPGSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1621
>06_03_1282 -
28946363-28946533,28947234-28947272,28947399-28947566,
28947605-28947697,28948135-28948215,28948409-28948499,
28948657-28948728,28948803-28948903,28949283-28949381,
28949631-28949954
Length = 412
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 13 IVVLCALV-AVSKAGLLAAPVHYAPAEAVSSQSIVRHDQPQ 132
IV+L A V AV L P HY P VSS S P+
Sbjct: 15 IVILIAFVCAVGIGAYLYTPQHYTPCYLVSSNSCSSRPPPE 55
>02_05_1033 +
33642479-33642688,33643089-33643343,33643479-33643603,
33643827-33643908,33644008-33644076,33644102-33644341,
33644431-33644496,33645087-33645155,33645229-33645366,
33645681-33645754,33646146-33646255,33646428-33646525,
33646595-33646633,33646771-33646890,33646984-33647109,
33647321-33647382,33647467-33647518,33648182-33648436
Length = 729
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 117 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPL 272
P P ++P + Y + SV G P+ L PC VP CY+ P+
Sbjct: 679 PKPQTSPT--STLSYKLYVHTAEASVIGEPTSLLVSPCVVPPAGECYNRYPV 728
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Frame = +3
Query: 111 CAP*PASA---PRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYH 260
C P P+ P C+ CC C G C P P C + C P P C H
Sbjct: 129 CPPSPSCENHHPPCKPGCCC-CGCSGGECPPPPSPPC--QHEC--PPTPPCEH 176
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 28.3 bits (60), Expect = 2.2
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = +3
Query: 174 PRGPCSVP--GRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNIVRHDQPQTIQYA 347
P P S P RPS PR S P SP S A S Q + ++++
Sbjct: 27 PPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSPAPSPQQQRVASPPPTIPVKFS 86
Query: 348 APVAKLAV 371
P A + V
Sbjct: 87 PPAAPVKV 94
>01_05_0214 - 19362812-19363477
Length = 221
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 165 CSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
C LP P P +PS P P P P+ TSPL A+ + I
Sbjct: 29 CPLPLSPPYSPAQPSPPPTSP---PASPTLLPTSPLSDDHADHTTDSLI 74
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 192 VPGRPSCLPRGPCSVPGRPSCYHTSPLRY 278
+PG P P+G S PGRP +SP+ +
Sbjct: 221 IPG-PLAFPKGLTSAPGRPRVAPSSPVMF 248
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGP 227
P + P+G S PGRP P P
Sbjct: 224 PLAFPKGLTSAPGRPRVAPSSP 245
>04_03_0799 - 19805190-19805749,19806316-19806403
Length = 215
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +3
Query: 108 HCAP*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSC 254
HC P P C + C G C+ P C G CS+ +C
Sbjct: 124 HCCPAPPKPKPKPCECTHHCGGHGGGCNKPAVSPC--GGGCSISDGGAC 170
>04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966
Length = 766
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 165 CSLPRGPCSVPGRPSCLPRG-PCSVP-GRP 248
C+ P+ PCSVPG LP G C P RP
Sbjct: 322 CADPKYPCSVPGTCHNLPGGFECLCPRSRP 351
>03_05_1002 -
29594462-29594581,29594686-29594781,29594857-29594916,
29595574-29595618,29595956-29596070,29596200-29596246,
29596529-29596822
Length = 258
Score = 27.5 bits (58), Expect = 3.8
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +3
Query: 168 SLPRGPCSVP--GRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNIVRHDQPQ 332
SLP S+P RP+ PR +PGR C+ + A + S V P+
Sbjct: 9 SLPVPRVSLPPSARPAAAPRHGLLIPGRRGCFRLRGSPAAPAAAASGSPSVPSSSPE 65
>03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427
Length = 143
Score = 27.5 bits (58), Expect = 3.8
Identities = 21/65 (32%), Positives = 22/65 (33%)
Frame = +3
Query: 102 PKHCAP*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
P C P AP C Y C P + P P G VP PS T S
Sbjct: 22 PSRCRTLPQPAPTSHEVCPYRCQSPSAANHIRIPPQHAPAGAEVVP--PSAGATPGTSPS 79
Query: 282 SAESV 296
AE V
Sbjct: 80 EAEVV 84
>11_01_0730 -
6037375-6037509,6037892-6038019,6038339-6038423,
6038525-6038614,6040015-6040113,6040207-6040335,
6041341-6041463,6041549-6041711,6042331-6042380,
6042593-6042706,6042993-6043199,6043275-6043412,
6044708-6044770,6044845-6044928,6045014-6045094,
6045212-6045363,6045479-6045614,6045991-6046107
Length = 697
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 44 RKLDFWLLPCTTLPLKPFLP 103
R+ DFWLL T LK F+P
Sbjct: 521 RRKDFWLLSTVTKLLKEFIP 540
>09_04_0379 - 17094540-17094868,17095354-17095717
Length = 230
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 383 TGAADGQLGYRSGVLDSLGLVMTDDVLGRDRFSRGVAEW 267
+G G G+R + G M +D + D RGV W
Sbjct: 3 SGVDSGGCGHRRRAVAWCGTWMVEDAVAGDELQRGVGVW 41
>07_03_0234 + 15561003-15561482,15562495-15562590,15562663-15562758
Length = 223
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSS 302
P APR ++ P + PR + P + P GP P + LR S+A + +
Sbjct: 73 PNPAPRSRSSRRSPLASPRTGTASPLSAAVAPGGPAPSPASAAVSSVGDLRSSAASQMEA 132
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Frame = +3
Query: 102 PKHCAP*PA-----SAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPC 230
P C P PA S+ +A C C PR C C P PC
Sbjct: 661 PSPCDPPPANGDASSSTGGRASCGQVCGAPRRECKHTCTAPCHPSSPC 708
>04_04_1677 +
35306232-35306328,35306697-35307248,35307324-35307608,
35308035-35308296,35308378-35308430,35308520-35308587,
35310331-35310420,35310502-35310586,35310822-35311254,
35312872-35313439,35313527-35314000
Length = 988
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 204 PSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNIVRHDQPQTIQYAAP 353
PS PR P S GRP Y SP R S ++ ++ H P +P
Sbjct: 687 PSSPPRSPTSRGGRPVYYVQSPSRDSHDGEKTATSV--HSTPALSPMGSP 734
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 27.1 bits (57), Expect = 5.1
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 198 GRPSCLPRGPC---SVPGRPSCYHTSPLRYS 281
GRPS P GPC S+P R S Y SP R+S
Sbjct: 1395 GRPSDPPPGPCSGWSMPPRSSNY--SPSRHS 1423
>10_01_0197 + 2148109-2149551
Length = 480
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 40 VSKAGLLAAPVHYAPAEAVSSQSIVRHDQ 126
VS A ++AP Y S S +RHDQ
Sbjct: 96 VSSANTISAPTCYVNPFRTSQSSTIRHDQ 124
>09_04_0464 +
17820164-17820181,17820972-17821065,17821251-17821429,
17821959-17822009,17822683-17822739,17822854-17822974,
17823187-17823253,17823342-17823383,17823629-17823734,
17823864-17823974,17824248-17824319,17824423-17824524,
17824597-17824758,17824961-17825119
Length = 446
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +3
Query: 147 ARCCYPCSLPRGPCSVPGR--PSCLPRGPCS 233
+ CC P PR PG P LP CS
Sbjct: 416 SECCTPAKYPRDAMDAPGTDIPELLPPTKCS 446
>08_02_1098 - 24291138-24291851,24292607-24292861
Length = 322
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 147 ARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTS 266
A C Y + G + G+ +P G C+ P P YH S
Sbjct: 219 AACAYSYNRTGG---IAGKKCNIPNGSCNYPTCPKSYHGS 255
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPSCLPR--GPCSVPGRPSC 254
YP P G C+ P C P+ P P +P+C
Sbjct: 113 YPPPPPCGGCATPHCCDCHPKPPPPAPAPAKPAC 146
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 26.6 bits (56), Expect = 6.7
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 114 AP*PASAPRCQARCCYPCSLPRGPCSVPGRP-SCLPRGPCSVPGRP 248
AP PA AP A P SLP P PG P S L R G P
Sbjct: 102 APPPAPAPDQPAPPSPPPSLPPSP-PAPGSPESMLEREASEADGEP 146
>12_01_0584 -
4762476-4762613,4763986-4764075,4765048-4765146,
4766032-4766154,4766243-4766405,4767307-4767356,
4767826-4767942,4769477-4769683,4769763-4769900,
4771212-4771274,4771358-4771441,4771933-4772084,
4772219-4772357,4772814-4772924
Length = 557
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 38 RCRKLDFWLLPCTTLPLKPFLPKALC 115
+ R+ DFW L LK F+PK LC
Sbjct: 449 KVRRKDFWQLSAVNKILKEFIPK-LC 473
>03_02_0123 +
5745390-5745576,5745993-5746082,5746255-5746351,
5746446-5746584
Length = 170
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGPCSVPGRPSCLP 218
P +APRC+ RC + P G LP
Sbjct: 12 PVTAPRCRGRCSAATAATSAPEKTAGHVGRLP 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.125 0.343
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,184,018
Number of Sequences: 37544
Number of extensions: 163686
Number of successful extensions: 613
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
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