Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0668
(384 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36095| Best HMM Match : DMP1 (HMM E-Value=3.2) 39 0.001
SB_49936| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_57270| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.32
SB_55591| Best HMM Match : TIL (HMM E-Value=4.2e-09) 31 0.32
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 31 0.32
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 29 1.3
SB_3877| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 28 2.3
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 28 3.0
SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0) 28 3.0
SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11) 28 3.0
SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_27523| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-09) 27 4.0
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 27 4.0
SB_43297| Best HMM Match : Astacin (HMM E-Value=3.5e-31) 27 5.2
SB_23501| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_1496| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.2
SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_42806| Best HMM Match : MORN (HMM E-Value=0) 27 6.9
SB_54676| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_16326| Best HMM Match : Sushi (HMM E-Value=5.4e-18) 26 9.2
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 26 9.2
SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_51338| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_15358| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.03) 26 9.2
SB_14129| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
>SB_36095| Best HMM Match : DMP1 (HMM E-Value=3.2)
Length = 939
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 123 PASAPRCQARCC-YPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESV 296
PA AP A+ YP +P P VPG P+ P P VPG P+ P + + SV
Sbjct: 869 PAQAPGYPAQAPGYPAQVPGYPAQVPGYPAQAPGCPAQVPGYPAQVPGYPAQVPAGSSV 927
Score = 34.3 bits (75), Expect = 0.035
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 99 FPKHCAP*PASAPRCQARCC-YPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSC-YHTSPL 272
+P PA P A+ YP P P VPG P+ +P P VP S Y +SP
Sbjct: 875 YPAQAPGYPAQVPGYPAQVPGYPAQAPGCPAQVPGYPAQVPGYPAQVPAGSSVQYVSSPQ 934
Query: 273 RY 278
++
Sbjct: 935 QF 936
Score = 27.9 bits (59), Expect = 3.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 174 PRGPCSVPGRPSCLPRGPCSVPGRPS 251
P P PG P+ P P VPG P+
Sbjct: 866 PGNPAQAPGYPAQAPGYPAQVPGYPA 891
>SB_49936| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 32.7 bits (71), Expect = 0.11
Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Frame = +3
Query: 135 PRCQAR--CCY---PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PRC C Y PC PC RP C PC RP Y P RY+
Sbjct: 183 PRCYTLRPCRYMLRPCRYMLRPCRYMLRPCCYTLRPCRYMLRPCRYTLRPCRYT 236
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRY 278
PC PC RP C PC RP Y P RY
Sbjct: 169 PCRYTLRPCRYTLRPRCYTLRPCRYMLRPCRYMLRPCRY 207
Score = 31.5 bits (68), Expect = 0.24
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +3
Query: 153 CCY---PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
CCY PC PC RP PC RP Y P RY+
Sbjct: 212 CCYTLRPCRYMLRPCRYTLRPCRYTLRPCRYTLRPCRYTLRPCRYT 257
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP PC RP Y P RY+
Sbjct: 260 PCGYTLRPCGYTLRPHRYTLRPCRYTLRPCRYTLRPCRYT 299
Score = 28.3 bits (60), Expect = 2.3
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP PC RP Y P RY+
Sbjct: 246 PCRYTLRPCRYTLRPCGYTLRPCGYTLRPHRYTLRPCRYT 285
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP PC RP Y P RY+
Sbjct: 281 PCRYTLRPCRYTLRPCRYTLRPCRYTLRPRRYTLRPCRYT 320
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP C PC R Y P Y+
Sbjct: 386 PCRYTLSPCRYTLRPRCCTLRPCRYTLRTCRYALRPRHYT 425
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP PC RP Y P RY+
Sbjct: 211 PCCYTLRPCRYMLRPCRYTLRPCRYTLRPCRYTLRPCRYT 250
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP PC RP Y P RY+
Sbjct: 239 PCRYTLRPCRYTLRPCRYTLRPCGYTLRPCGYTLRPHRYT 278
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP PC RP Y P RY+
Sbjct: 456 PCRYTLRPCRYMLRPCRYRLRPCGYTLRPCRYMLRPCRYT 495
Score = 27.1 bits (57), Expect = 5.2
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP PC RP Y P RY+
Sbjct: 204 PCRYMLRPCCYTLRPCRYMLRPCRYTLRPCRYTLRPCRYT 243
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRY 278
PC PC RP PC RP Y P RY
Sbjct: 435 PCRYTLRPCRYMLRPCRYMLRPCRYTLRPCRYMLRPCRY 473
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYS 281
PC PC RP PC RP Y P RY+
Sbjct: 463 PCRYMLRPCRYRLRPCGYTLRPCRYMLRPCRYTLRPCRYT 502
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRY 278
PC PC RP PC RP Y P RY
Sbjct: 449 PCRYMLRPCRYTLRPCRYMLRPCRYRLRPCGYTLRPCRY 487
>SB_59202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1530
Score = 31.1 bits (67), Expect = 0.32
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 102 PKHCAP*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHT 263
P+ C+ + C ++C C P G RG C PG+ SCYH+
Sbjct: 770 PRDCSNMNSDPNACNSKCVDGCFCPEGKIQ--------DRGKCVDPGQCSCYHS 815
>SB_57270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 31.1 bits (67), Expect = 0.32
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSP--LRYSSAESVSSQNIVRHDQPQT 335
P ++ PC+V P + PC+V P SP +++S S V+H P T
Sbjct: 103 PYTVQHSPCTVQHSPYTVQHSPCTVQHSPYTVQHSPYTVQHSPYAVQHSPYTVQH-SPYT 161
Query: 336 IQYAAPVAK 362
+Q++ A+
Sbjct: 162 VQHSPYTAQ 170
>SB_55591| Best HMM Match : TIL (HMM E-Value=4.2e-09)
Length = 133
Score = 31.1 bits (67), Expect = 0.32
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +3
Query: 102 PKHCAP*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHT 263
P+ C+ + C ++C C P G RG C PG+ SCYH+
Sbjct: 71 PRDCSNMNSDPNACNSKCVDGCFCPEGKIQ--------DRGKCVDPGQCSCYHS 116
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 31.1 bits (67), Expect = 0.32
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +3
Query: 123 PASAPRCQARCC--YPCSLPRGPCSVPGRPSCLPRG-PCSVPGRPS 251
P+ AP CC YP P P + P +P+ PR P + P P+
Sbjct: 507 PSCAPTYSPSCCGSYPAPQPPSPPAPPPKPAPPPRSPPAAAPCNPA 552
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 135 PRC-QARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQ 305
P C Q RCC ++P+GP P P + + P +P P +P+ A Q
Sbjct: 441 PICIQHRCCN-ANMPQGPPPPPPPPPQMYQQPLMMPQAPMMMPQAPMMMPQAPMTMQQ 497
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTS 266
YP + PC +P SC P+ PCS PG Y TS
Sbjct: 736 YPPYTGQVPC-LPS--SCTPQNPCSPPGCTPQYSTS 768
>SB_3877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 28.7 bits (61), Expect = 1.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPSCLPRGPCSVP 239
+ C LP C +P CLP C +P
Sbjct: 27 HKCGLPYNECGLPYNKCCLPYTNCGLP 53
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 28.3 bits (60), Expect = 2.3
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 126 ASAPRCQARCCY--PCSLPRGPCSVPGRPSCLPRGPC 230
AS + A C Y PCS G CSV G +C PC
Sbjct: 2 ASCLQVTATCSYGNPCS-NGGSCSVDGSETCSNSNPC 37
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 156 CYPCSLPRGPCSVPGRPSCLPRGPCSVPG-RPSCYHT 263
C C++PR C++P LP C++P P C T
Sbjct: 846 CMMCAIPRVICAIPRVMYALPCVMCAIPRVIPPCAST 882
>SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 1381
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 34 VAVSKAGLLAAPVHYAPAEAVSSQS 108
VAV K+ L +P PA AVSSQS
Sbjct: 1081 VAVDKSSWLGSPPFLLPARAVSSQS 1105
>SB_16595| Best HMM Match : Peptidase_A17 (HMM E-Value=9.1e-11)
Length = 1692
Score = 27.9 bits (59), Expect = 3.0
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSC---YHTSPLRYSSAES 293
YP + P ++PG S P ++PG PS Y T+ RY A +
Sbjct: 332 YPSANTGYPTAIPGYSSANTGYPTAIPGYPSANTGYPTATPRYPPAST 379
>SB_19560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.5 bits (58), Expect = 4.0
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Frame = +3
Query: 117 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSP-LRYSSAES 293
P A+ C A PCS PCS P P RP+ HT P L ++
Sbjct: 34 PRSATLAPCSATLA-PCSATLAPCSALTCPMLGHTRPTLGHTRPTLGHTRPTLGHTRPML 92
Query: 294 VSSQNIVRHDQP---QTIQYAAPVAKLAVSCSR 383
++ ++ H P T + A V + +C+R
Sbjct: 93 GHTRPMLGHTHPLLGHTCRLIAKVYSVGQNCNR 125
>SB_27523| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-09)
Length = 666
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 135 PRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSP 269
P QAR Y L GP ++PG P +P+ + PG + SP
Sbjct: 339 PTPQARWIYQEELCTGPETIPG-PEMIPKSTPTDPGTRNDTEESP 382
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 189 SVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQ 305
SVPG P+C+PRG R Y + + E V S+
Sbjct: 1389 SVPGTPACVPRGKSISKLRLFRYDAAERVFDEGEDVFSR 1427
>SB_43297| Best HMM Match : Astacin (HMM E-Value=3.5e-31)
Length = 716
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 180 GPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNIVRHDQPQTIQYAAPVA 359
GP V G + L P V + H + R S+ ++ +++NI RH + +
Sbjct: 622 GPSHVQGSRTRLRTSPYGVCAQVDGKHFNASRKSAVQNRNNENIGRHSSHHNARQTTRLC 681
Query: 360 KLAVS 374
L VS
Sbjct: 682 LLPVS 686
>SB_23501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +3
Query: 111 CAP*PASAPRCQARC-CYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCY 257
C P +CQ Y C +G P R SC CS+ P Y
Sbjct: 127 CQTNPCGGAQCQNTLGSYYCGCAQGNILAPNRRSCQDINECSMGINPCSY 176
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHT 263
YP + PC +P SC P+ PCS PG Y T
Sbjct: 255 YPPYTGQIPC-LPS--SCAPQNPCSPPGCTPQYST 286
>SB_1496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 27.1 bits (57), Expect = 5.2
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = +3
Query: 156 CYPCSLPR-GPCSVPGRPSCLPRGPCSVPG 242
C C P C +PG SC P G S PG
Sbjct: 478 CASCPPPGCASCPLPGCASCQPPGCASCPG 507
>SB_11301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +3
Query: 195 PGRPSCLPRGPC----SVPGRPSCYHTSPLRYSSAESVSSQNIV 314
P R SC PC S P R SC+ T P + + + + Q V
Sbjct: 22 PARRSCHTTQPCKGQLSHPARSSCHTTQPCKEKLSHNTTLQGEV 65
>SB_42806| Best HMM Match : MORN (HMM E-Value=0)
Length = 778
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 61 PEVQLSTPRPKRTVLRFWRT 2
PEVQL +P P++ + +W T
Sbjct: 653 PEVQLPSPPPEQDNMHYWET 672
>SB_54676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 926
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 25 CALVAVSKAGLLAAPVHYAPAEAVSSQSIVRHDQ 126
C L+A S L P+HYA +A S ++ D+
Sbjct: 212 CKLIAQSGTRLERTPLHYAALKAASLNAVYDVDE 245
>SB_16326| Best HMM Match : Sushi (HMM E-Value=5.4e-18)
Length = 258
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = +3
Query: 141 CQARCCYPCSLPRGPCSVPG----RPSCLPRGPCSVPGRPSC 254
C+A+C P + G V R SC P S PGR SC
Sbjct: 62 CKAQCILPSLISNGVARVRDGTTIRYSCNPGYTRSGPGRASC 103
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -2
Query: 371 DGQLGYRS--GVLDSLGLVMTDD 309
DG+L + VLDSLGL MTDD
Sbjct: 685 DGKLSRKEFREVLDSLGLYMTDD 707
>SB_9368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = +3
Query: 252 CYHTSPLRYSSAESVSSQNIVRHDQPQTIQYAAPVAKLAVSC 377
C H P A+ + N RHD + A + KL+ C
Sbjct: 291 CGHLHPKPLVIADRFNFHNRFRHDSETVADFGAQLKKLSTHC 332
>SB_51338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 171 LPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPL 272
+P G V R +C+P G V R +C P+
Sbjct: 203 IPHGGLLVLSRSTCIPHGGLLVLSRSTCRRAYPM 236
>SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 377 AADGQLGYRSGVLDSLGLVMTDDVLGRDRF 288
+ DG GY SGV + L TD G+ RF
Sbjct: 513 SGDGSEGYGSGVTSGVDLPFTDIKGGQGRF 542
>SB_15358| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.03)
Length = 435
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 156 CYPCSLPRGPCSVPGRPSCLPRGPCSVPGRP 248
C P LP P +PG P LP P +P P
Sbjct: 204 CLPGVLPGLPGVLPGLPGVLPGLPGVLPALP 234
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSP 269
P LP P +PG P LP P +PG P P
Sbjct: 213 PGVLPGLPGVLPGLPGVLPALPGVLPGLPGVLPALP 248
>SB_14129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 26.2 bits (55), Expect = 9.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 259 TLLHSATPRLNLSRPKTSSVMTSPRLS 339
+L+ S TPR N+S K ++ SPR S
Sbjct: 12 SLIQSRTPRYNMSTVKATTRPPSPRTS 38
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.125 0.343
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,150,391
Number of Sequences: 59808
Number of extensions: 178958
Number of successful extensions: 716
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
- SilkBase 1999-2023 -