Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0668
(384 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 37 0.006
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 33 0.052
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 33 0.052
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.052
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 33 0.052
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.069
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 33 0.069
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 32 0.16
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 32 0.16
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.21
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 0.28
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 0.28
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 30 0.49
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 30 0.49
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 30 0.49
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 30 0.49
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 30 0.49
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 1.5
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 1.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 28 2.0
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 28 2.0
L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein. 28 2.0
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 28 2.0
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 28 2.0
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 28 2.6
Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical pr... 27 3.4
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 27 3.4
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 27 3.4
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 27 3.4
AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical ... 27 3.4
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 27 4.5
Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 27 4.5
U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter... 27 4.5
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 27 4.5
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 27 4.5
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 27 4.5
Z74039-7|CAA98506.1| 290|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 27 6.0
U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protei... 27 6.0
U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protei... 27 6.0
U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter... 27 6.0
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 27 6.0
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 27 6.0
AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen pro... 27 6.0
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 26 7.9
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 26 7.9
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 26 7.9
AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical... 26 7.9
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 36.7 bits (81), Expect = 0.006
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = +3
Query: 117 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSP 269
P P AP +CC R PC R C P G C GRP CY+ +P
Sbjct: 146 PPPPPAPEAPTQCCGSQPYGRTPC----RSGC-PNGDCGC-GRPCCYYQNP 190
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Frame = +3
Query: 141 CQARCCY---PCSLPRGPCSVPGRPSCLPR-GPCSVPGRPSC 254
C + CC P L P P +P C P GPC P P+C
Sbjct: 56 CSSSCCSSQKPIPLACCPPPPPPKPCCQPAFGPC-CPATPNC 96
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 33.5 bits (73), Expect = 0.052
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
AP CQ +C C+LP P + SC C P C + + +S +
Sbjct: 270 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 329
Query: 312 V 314
V
Sbjct: 330 V 330
Score = 27.9 bits (59), Expect = 2.6
Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGP-------CSVPGRPSCLPRGP-CSVPGRPSCYHTSPLRYSSA 287
AP+CQ +C C L + P C+ P + +C P C P C S +
Sbjct: 203 APQCQQQCQQQCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAPQCQQPSAPQCQQC 262
Query: 288 ESVSSQNIVRHDQPQTIQYAAPVAKLAVSC 377
++ Q Q Q P A C
Sbjct: 263 QNTCQQYAPVCQQQCAPQCTLPSAPACQQC 292
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 33.5 bits (73), Expect = 0.052
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
AP CQ +C C+LP P + SC C P C + + +S +
Sbjct: 271 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 330
Query: 312 V 314
V
Sbjct: 331 V 331
Score = 27.9 bits (59), Expect = 2.6
Identities = 22/90 (24%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGP-------CSVPGRPSCLPRGP-CSVPGRPSCYHTSPLRYSSA 287
AP+CQ +C C L + P C+ P + +C P C P C S +
Sbjct: 204 APQCQQQCQQQCLLQQVPVQQCYQECTQPCQTTCQQAAPQCVQQCAPQCQQPSAPQCQQC 263
Query: 288 ESVSSQNIVRHDQPQTIQYAAPVAKLAVSC 377
++ Q Q Q P A C
Sbjct: 264 QNTCQQYAPVCQQQCAPQCTLPSAPACQQC 293
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.052
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
AP CQ +C C+LP P + SC C P C + + +S +
Sbjct: 186 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 312 V 314
V
Sbjct: 246 V 246
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 33.5 bits (73), Expect = 0.052
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
AP CQ +C C+LP P + SC C P C + + +S +
Sbjct: 410 APVCQQQCAPQCTLPSAPACQQCQTSCQQTQQCHQQCIPQCQQPAAPQCQQCQSACQSPV 469
Query: 312 VRHDQPQTIQYAAPVAKLA 368
V Q T+ A V++ A
Sbjct: 470 VA-PQIVTVILEASVSQSA 487
Score = 32.3 bits (70), Expect = 0.12
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGP-CSVPGRPSCYHTSPLRYSSAESVSSQN 308
AP CQ +C C+LP P + SC P C P C + + +S
Sbjct: 309 APVCQQQCAPQCTLPSAPVCQQCQTSCQQFAPVCQEQCAPQCQQPAAPQCQQCQSACQSP 368
Query: 309 IV 314
++
Sbjct: 369 VI 370
Score = 28.3 bits (60), Expect = 2.0
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 14/91 (15%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGP-------CSVPGRPSCLPRGP-CSVPGRPSCYHTSPLRY 278
PA P+CQ C C + P C++ +P+C P C P C S +
Sbjct: 198 PAQCPQCQQTCHRQCVQQQFPVQQCTQQCTLECQPTCQQAVPQCQQQCAPQCQQPSAPQC 257
Query: 279 SSAES------VSSQNIVRHDQPQTIQYAAP 353
+S V+ Q I PQ Q AP
Sbjct: 258 QQCQSACQSPVVAPQIITLEVVPQCQQQCAP 288
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 33.1 bits (72), Expect = 0.069
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
AP CQ +C C+LP P + SC C P C + + +S +
Sbjct: 186 APVCQQQCTPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 312 V 314
V
Sbjct: 246 V 246
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 33.1 bits (72), Expect = 0.069
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
AP CQ +C C+LP P + SC C P C + + +S +
Sbjct: 186 APVCQQQCTPQCTLPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 312 V 314
V
Sbjct: 246 V 246
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 31.9 bits (69), Expect = 0.16
Identities = 15/61 (24%), Positives = 22/61 (36%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
AP CQ +C C+ P P + SC C P C + + +S +
Sbjct: 186 APVCQQQCAPQCTFPSAPACQQCQTSCQQTQQCQQQCIPQCQQPAAPQCQQCQSACQSPV 245
Query: 312 V 314
V
Sbjct: 246 V 246
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +3
Query: 117 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPG--RPSCYHTSPL 272
P P P C C P +P P V G P C GP P P+C +P+
Sbjct: 59 PPPCFGPACPPPCFGPACVPLAPIIVNGPPPCF--GPACPPPCFGPACAPPAPI 110
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = +3
Query: 117 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPG--RPSCYHTSPL 272
P P P C C P P P V G P C GP P P+C ++P+
Sbjct: 87 PPPCFGPACPPPCFGPACAPPAPIIVNGPPPCF--GPACPPPCFGPACAPSAPI 138
Score = 29.9 bits (64), Expect = 0.64
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 2/53 (3%)
Frame = +3
Query: 117 P*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPG--RPSCYHTSP 269
P P P C C P P P V G P C GP P P+C P
Sbjct: 115 PPPCFGPACPPPCFGPACAPSAPIIVNGPPPCF--GPACPPPCFGPACAPPPP 165
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/70 (22%), Positives = 23/70 (32%)
Frame = +3
Query: 129 SAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQN 308
+AP CQ +C C P + SC C P C S + +S
Sbjct: 272 AAPVCQQQCAPQCQQQSAPACQQCQTSCQQTQQCQQQCTPQCQQPSAPQCQQCQSACQAP 331
Query: 309 IVRHDQPQTI 338
+ PQ +
Sbjct: 332 VATTAAPQAV 341
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/70 (22%), Positives = 23/70 (32%)
Frame = +3
Query: 129 SAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQN 308
+AP CQ +C C P + SC C P C S + +S
Sbjct: 272 AAPVCQQQCAPQCQQQSAPACQQCQTSCQQTQQCQQQCTPQCQQPSAPQCQQCQSACQAP 331
Query: 309 IVRHDQPQTI 338
+ PQ +
Sbjct: 332 VATTAAPQVV 341
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.28
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPR----GPCSVPGRP---SCYHTSP 269
P++ +C+ CC P P GP VPG+P R G VPG+P C T+P
Sbjct: 94 PSANLQCEG-CCLPG--PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTP 146
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 31.1 bits (67), Expect = 0.28
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPR----GPCSVPGRP---SCYHTSP 269
P++ +C+ CC P P GP VPG+P R G VPG+P C T+P
Sbjct: 94 PSANLQCEG-CCLPG--PPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTP 146
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPS 251
P PR PC P R C P G C G S
Sbjct: 1925 PSPPPRHPCQDPERNDCHPAGTCRATGAQS 1954
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 150 RCCYPCSL-PRGP--CSVPGRPSCLPRG 224
+C YP S P P C V R CLPRG
Sbjct: 976 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1003
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPS 251
P PR PC P R C P G C G S
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTCRATGAQS 2538
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 150 RCCYPCSL-PRGP--CSVPGRPSCLPRG 224
+C YP S P P C V R CLPRG
Sbjct: 1560 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1587
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPS 251
P PR PC P R C P G C G S
Sbjct: 1925 PSPPPRHPCQDPERNDCHPAGTCRATGAQS 1954
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 150 RCCYPCSL-PRGP--CSVPGRPSCLPRG 224
+C YP S P P C V R CLPRG
Sbjct: 976 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1003
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPS 251
P PR PC P R C P G C G S
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTCRATGAQS 2538
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 150 RCCYPCSL-PRGP--CSVPGRPSCLPRG 224
+C YP S P P C V R CLPRG
Sbjct: 1560 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1587
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 30.3 bits (65), Expect = 0.49
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPGRPS 251
P PR PC P R C P G C G S
Sbjct: 2509 PSPPPRHPCQDPERNDCHPAGTCRATGAQS 2538
Score = 27.1 bits (57), Expect = 4.5
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = +3
Query: 150 RCCYPCSL-PRGP--CSVPGRPSCLPRG 224
+C YP S P P C V R CLPRG
Sbjct: 1560 QCAYPGSCNPNDPMSCDVRKRQQCLPRG 1587
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 1.1
Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Frame = +3
Query: 117 P*PASAPRCQARCCYPCSLPRGPCSVPG-RPS-CLPRGPCSVPGR--------PSCYHTS 266
P P SAP C C +P PC P RP+ C+ P VP R P+C +
Sbjct: 154 PPPPSAPAC----CVAAPVPTNPCCQPAPRPAPCVCSAPRPVPCRCGAPPMECPNCDMPA 209
Query: 267 PLRYSSAESVSSQNIVRHDQPQTI 338
P A S +R D Q I
Sbjct: 210 PRCSMMAPMECSMRRMRRDVHQQI 233
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Frame = +3
Query: 111 CAP*PASAPRCQARCCYPCSLPRGPCSVPGRPS------CLPRGPCSVPGRPSC 254
C P P AP CC P P PC P P C + P VP P C
Sbjct: 100 CGPSPVPAP-----CCPPPPAPAAPCCPPPPPPTPSPLVCCKQAP--VPENPCC 146
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 29.1 bits (62), Expect = 1.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +3
Query: 123 PASAPRCQARC---CYPCSLPRGPCSV-PGRPSCLPRGPCSVPGRPSCYHT 263
P+ AP+CQ C C +L + P PSC P+ C +PSC T
Sbjct: 648 PSCAPQCQPACDPQCISFTLKLPVMTTPPPTPSCQPQ--CQPACQPSCMET 696
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGPCSVPGRP-----SCLPRGPCSVPGRPSCYHTSPLRYSSA 287
P + P + P S P PC PG+P C VPG P H+S +
Sbjct: 41 PCAVPSSNSVIWLPASRP--PCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEG 98
Query: 288 ES--VSSQNIVRHDQPQTIQY 344
E ++ + I D P Y
Sbjct: 99 EGLLLTKERICFFDGPIDFHY 119
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGPCSVPGRP-----SCLPRGPCSVPGRPSCYHTSPLRYSSA 287
P + P + P S P PC PG+P C VPG P H+S +
Sbjct: 41 PCAVPSSNSVIWLPASRP--PCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEG 98
Query: 288 ES--VSSQNIVRHDQPQTIQY 344
E ++ + I D P Y
Sbjct: 99 EGLLLTKERICFFDGPIDFHY 119
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 28.7 bits (61), Expect = 1.5
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 7/81 (8%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGPCSVPGRP-----SCLPRGPCSVPGRPSCYHTSPLRYSSA 287
P + P + P S P PC PG+P C VPG P H+S +
Sbjct: 41 PCAVPSSNSVIWLPASRP--PCLHPGQPIIHWPDLSDNLACPVPGLPDSVHSSQISLLEG 98
Query: 288 ES--VSSQNIVRHDQPQTIQY 344
E ++ + I D P Y
Sbjct: 99 EGLLLTKERICFFDGPIDFHY 119
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSL-PRGPCSVPGRPSCLPRGPCSVPGRP 248
ASA C A CC P + P G PGRP P P +PG P
Sbjct: 91 ASAGGCDA-CCLPGAAGPAGTPGKPGRPG-KPGAP-GLPGNP 129
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSL-PRGPCSVPGRPSCLPRGPCSVPGRP 248
ASA C A CC P + P G PGRP P P +PG P
Sbjct: 91 ASAGGCDA-CCLPGAAGPAGTPGKPGRPG-KPGAP-GLPGNP 129
>Z71178-2|CAA94875.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.2 protein.
Length = 297
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 195 PGRPSCLPRGPCSVPGRPSCYHTS 266
P +P C PRGP PGRP TS
Sbjct: 98 PAKPRC-PRGPPGPPGRPGQRGTS 120
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSL-PRGPCSVPGRPSCLPRGPCSVPGRP 248
ASA C A CC P + P G PGRP P P +PG P
Sbjct: 91 ASAGGCDA-CCLPGAAGPAGTPGKPGRPG-KPGAP-GLPGNP 129
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSL-PRGPCSVPGRPSCLPRGPCSVPGRP 248
ASA C A CC P + P G PGRP P P +PG P
Sbjct: 91 ASAGGCDA-CCLPGAAGPAGTPGKPGRPG-KPGAP-GLPGNP 129
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSL-PRGPCSVPGRPSCLPRGPCSVPGRP 248
ASA C A CC P + P G PGRP P P +PG P
Sbjct: 91 ASAGGCDA-CCLPGAAGPAGTPGKPGRPG-KPGAP-GLPGNP 129
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = +3
Query: 129 SAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAES 293
SAP CQ +C C P + SC C P C S + +S
Sbjct: 94 SAPVCQQQCAPQCQQQFAPACQQCQNSCQQTQQCQQQCTPQCQQPSTPQCQQCQS 148
>L12706-1|AAA17398.2| 360|Caenorhabditis elegans collagen protein.
Length = 360
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 156 CYPCSLPRGPCSVPGRPSCLPRGP--CSVPGRP 248
C PC P+GP VPG P P P + GRP
Sbjct: 168 CLPC--PQGPAGVPGHPG-FPGDPGEYGIGGRP 197
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSL-PRGPCSVPGRPSCLPRGPCSVPGRP 248
ASA C A CC P + P G PGRP P P +PG P
Sbjct: 91 ASAGGCDA-CCLPGAAGPAGTPGKPGRPG-KPGAP-GLPGNP 129
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.3 bits (60), Expect = 2.0
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSL-PRGPCSVPGRPSCLPRGPCSVPGRP 248
ASA C A CC P + P G PGRP P P +PG P
Sbjct: 91 ASAGGCDA-CCLPGAAGPAGTPGKPGRPG-KPGAP-GLPGNP 129
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGP-CSVPGRPSCYHTSPLRYSSAESVSSQN 308
AP CQ +C C++ P + +C P C P C S + +S
Sbjct: 185 APVCQQQCAPQCTISSAPQCQQCQTTCQQFAPVCQQQCAPQCQQPSAPQCQQCQSACQSP 244
Query: 309 IV 314
+V
Sbjct: 245 VV 246
>Z82077-2|CAB04940.1| 722|Caenorhabditis elegans Hypothetical
protein W09C5.5 protein.
Length = 722
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +3
Query: 138 RCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSP 269
RC C P P + P RP LP P + G P ++P
Sbjct: 139 RCSNAARNNCGAPGAPGAQPSRPPILPPIPTTPTGFPVAALSTP 182
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 174 PRGPCSVPGRPSCLPRGPCSVPGRPSCYHT 263
PRGP +PG P P P PG P Y T
Sbjct: 238 PRGPPGIPGAPG-QPGRP-GPPGEPGTYKT 265
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPG 242
PC P G PG+P P GP PG
Sbjct: 201 PCEAPPGDGGPPGQPG--PDGPPGAPG 225
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/61 (24%), Positives = 21/61 (34%)
Frame = +3
Query: 132 APRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSSAESVSSQNI 311
AP C+ +C C P P + SC C P C S + +S +
Sbjct: 423 APVCEQQCAPQCYQPSAPQCQQCQASCQQTQQCQQQCIPQCQQPSAPQCQQCQSACQFPV 482
Query: 312 V 314
V
Sbjct: 483 V 483
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 174 PRGPCSVPGRPSCLPRGPCSVPGRPSCYHT 263
PRGP +PG P P P PG P Y T
Sbjct: 219 PRGPPGIPGAPG-QPGRP-GPPGEPGTYKT 246
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCSVPG 242
PC P G PG+P P GP PG
Sbjct: 182 PCEAPPGDGGPPGQPG--PDGPPGAPG 206
>AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical
protein C02H6.1 protein.
Length = 334
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 147 ARCCYPCS-LPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSS 284
ARC LP G LP P +PG P YH PL+ S
Sbjct: 247 ARCLASMGILPSDTRDNDGSCRFLPFRPSEMPGIPEAYHYYPLKNGS 293
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPS--CLPRGPCSVPGRPSC 254
YP S + C +P C P PC +P P C
Sbjct: 627 YPQSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCC 660
>Z77666-9|CAJ43912.1| 541|Caenorhabditis elegans Hypothetical
protein K08E7.5d protein.
Length = 541
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPS--CLPRGPCSVPGRPSC 254
YP S + C +P C P PC +P P C
Sbjct: 272 YPQSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCC 305
>Z77666-8|CAJ43910.1| 493|Caenorhabditis elegans Hypothetical
protein K08E7.5b protein.
Length = 493
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPS--CLPRGPCSVPGRPSC 254
YP S + C +P C P PC +P P C
Sbjct: 224 YPQSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCC 257
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical protein
K08E7.5a protein.
Length = 1221
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = +3
Query: 159 YPCSLPRGPCSVPGRPS--CLPRGPCSVPGRPSC 254
YP S + C +P C P PC +P P C
Sbjct: 952 YPQSYQQPSCGCQPQPQNCCAPPAPCCLPTIPCC 985
>U50191-3|AAK31557.1| 380|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 2 protein.
Length = 380
Score = 27.1 bits (57), Expect = 4.5
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +3
Query: 156 CYPCSLPRGPCSVPGRPSCLPRGP--CSVPGRP 248
C PC P+GP VPG P P P + GRP
Sbjct: 168 CLPC--PQGPRGVPGHPG-FPGDPGEYGIGGRP 197
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 111 CAP*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSC 254
C P P AP + P P P PG P P+ PC P C
Sbjct: 103 CQPGPQGAPGAPGKPGRP-GKPGAP-GFPGNPGKAPQKPCEEITPPPC 148
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +3
Query: 111 CAP*PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSC 254
C P P AP + P P P PG P P+ PC P C
Sbjct: 103 CQPGPQGAPGAPGKPGRP-GKPGAP-GFPGNPGKAPQKPCEEITPPPC 148
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 177 RGPCSVPGRPSCLPRGPCSVPGRP-SCYH 260
RG PG P P+GP PG P +C+H
Sbjct: 247 RGDAGNPGLPG--PQGPKGEPGNPGTCHH 273
>Z74039-7|CAA98506.1| 290|Caenorhabditis elegans Hypothetical
protein K03B8.7 protein.
Length = 290
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 129 SAPRCQARCCYPCSLPRGPCSVPGRPSC-LPRGPCS 233
+AP CC C PC + G PSC PR PC+
Sbjct: 22 TAPVRTELCC--CGCIEEPCPLVG-PSCPAPRAPCN 54
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSL-PRGPCSVPGRPSCLPRGPCSVPGRP 248
AS C A CC P + P G PGRP P P +PG P
Sbjct: 58 ASTGGCDA-CCLPGAAGPAGTPGKPGRPG-KPGAP-GLPGNP 96
>U40060-2|AAP82656.1| 108|Caenorhabditis elegans Collagen protein
172, isoform b protein.
Length = 108
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 174 PRGPCSVPGRPSCLPRGPCSVPGR 245
P+GP PGRP P+GP GR
Sbjct: 4 PQGPTGRPGRPG--PKGPKGEDGR 25
>U40060-1|AAA81141.1| 341|Caenorhabditis elegans Collagen protein
172, isoform a protein.
Length = 341
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 174 PRGPCSVPGRPSCLPRGPCSVPGR 245
P+GP PGRP P+GP GR
Sbjct: 237 PQGPTGRPGRPG--PKGPKGEDGR 258
>U12966-7|AAK84534.1| 352|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 17 protein.
Length = 352
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 123 PASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRP 248
P++ P + C S P GP G P GP +PG P
Sbjct: 137 PSAGPGDKCNCNTENSCPAGPAGPKGTPG--HDGPDGIPGVP 176
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 162 PCSLPRGPCSVPGRPSCLPRGPCS 233
PC+ P P P+C+P CS
Sbjct: 224 PCAAPVAPVYASAAPACVPGAVCS 247
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 26.6 bits (56), Expect = 6.0
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 13 IVVLCALVAVSKAGLLAAPVHYAPAEAVSSQSIVR 117
++VLCA+ LA HY E + S+ I+R
Sbjct: 345 VIVLCAVAVAISMMFLAVTRHYIQKEQMPSKRILR 379
>AC024751-11|ABF71718.1| 302|Caenorhabditis elegans Collagen
protein 46 protein.
Length = 302
Score = 26.6 bits (56), Expect = 6.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 144 QARCCYPCSLPRGPCSVPGRPSCLP--RGPCSVPGRPSCYHTS-PLRYSS 284
++R C C P+GP +PGR LP +G PG P+ P+ Y S
Sbjct: 94 RSRVC-ECRHPQGPPGIPGRDG-LPGTKGSEGAPGLPARLPCEPPVNYKS 141
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 10/68 (14%)
Frame = +3
Query: 156 CYPCSLPRGPCSVPGRPSCLP--RGPCSVP--------GRPSCYHTSPLRYSSAESVSSQ 305
C PC+ R P P +P+ P + P P +PS Y T+P++ + + Q
Sbjct: 35 CDPCAAARAPYYPPQQPAYQPQYQQPAYQPHYQQPAYQPQPSAYQTAPVQQAYQQPAPVQ 94
Query: 306 NIVRHDQP 329
N +P
Sbjct: 95 NYQTVSEP 102
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 26.2 bits (55), Expect = 7.9
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 3/87 (3%)
Frame = +3
Query: 126 ASAPRCQARCCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCYHTSPLRYSS---AESV 296
A P C +C +L + C + SC C PSC T + +
Sbjct: 388 ACQPSCSQQCIQAQNLCQSACQPSCQSSCGSNTQCVQACIPSCQQTCGQQAQPVIVVQQP 447
Query: 297 SSQNIVRHDQPQTIQYAAPVAKLAVSC 377
N V+ QPQ Q + +C
Sbjct: 448 QQNNCVQACQPQCQQTCGSNVQCVSAC 474
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 26.2 bits (55), Expect = 7.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 177 RGPCSVPGRPSCLPRGPCSVP 239
RG C P C PR PC+ P
Sbjct: 24 RGGCGGCPTPMCQPRMPCAAP 44
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Frame = +3
Query: 117 P*PASAPRCQAR-CCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRPSCY 257
P P A C C P P PC P P P PC + RPS Y
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMPRPSCPCMMQ-RPSFY 103
>AL117195-28|CAB55014.1| 458|Caenorhabditis elegans Hypothetical
protein Y57A10A.11 protein.
Length = 458
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 153 CCYPCSLPRGPCSVPGRPSCLPRGPCSVPGRP 248
CC P P GP PGRP P G G P
Sbjct: 258 CCLPG--PAGPPGAPGRPG--PPGKAGANGLP 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.125 0.343
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,231,735
Number of Sequences: 27780
Number of extensions: 124807
Number of successful extensions: 670
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
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