Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0666
         (566 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6BZP3 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q9UI42 Cluster: Carboxypeptidase A4 precursor; n=10; Eu...    33   3.5  
UniRef50_Q07SW1 Cluster: Putative uncharacterized protein; n=1; ...    32   8.1  
UniRef50_A6LW27 Cluster: Integral membrane sensor signal transdu...    32   8.1  

>UniRef50_A6BZP3 Cluster: Putative uncharacterized protein; n=1;
           Planctomyces maris DSM 8797|Rep: Putative
           uncharacterized protein - Planctomyces maris DSM 8797
          Length = 385

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 28/98 (28%), Positives = 51/98 (52%)
 Frame = -1

Query: 323 LINTIHRSQIRLPSIYLVIILLIST*IPVTIIIHYVRLFHEDWLNVRSGEQVSKISSQDQ 144
           L+N+  R+Q RL ++  V++L++   I V ++  + R F + W ++ S    + +S + Q
Sbjct: 30  LVNS-ERAQCRLWTVCYVVLLML---IFVAVLFPHPRFF-QPWASIDSQNASTIVSLEMQ 84

Query: 143 SSRILRFFFWKCPANCNERTQDIFCLLIFKLQVIMFLK 30
           + R+L FF W      +  T  +   L   +QV  FLK
Sbjct: 85  AGRVL-FFIW-----LSGTTLSLLVFLYRAVQVSSFLK 116


>UniRef50_Q9UI42 Cluster: Carboxypeptidase A4 precursor; n=10;
           Euteleostomi|Rep: Carboxypeptidase A4 precursor - Homo
           sapiens (Human)
          Length = 421

 Score = 33.5 bits (73), Expect = 3.5
 Identities = 15/34 (44%), Positives = 25/34 (73%)
 Frame = -1

Query: 194 LNVRSGEQVSKISSQDQSSRILRFFFWKCPANCN 93
           +NVR+G+++SK+ SQ  +S  L+  FWK P++ N
Sbjct: 29  INVRNGDEISKL-SQLVNSNNLKLNFWKSPSSFN 61


>UniRef50_Q07SW1 Cluster: Putative uncharacterized protein; n=1;
           Rhodopseudomonas palustris BisA53|Rep: Putative
           uncharacterized protein - Rhodopseudomonas palustris
           (strain BisA53)
          Length = 2470

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -1

Query: 233 IIIHYVRLFHEDWLNVRSGEQVSKISSQDQSSRILRFFFW 114
           +I HYVR    +WL+ R  +   K + Q  +  ILR F W
Sbjct: 472 VIPHYVRHLQMNWLSKREHKLTPKFAVQRNALAILRDFVW 511


>UniRef50_A6LW27 Cluster: Integral membrane sensor signal
           transduction histidine kinase precursor; n=1;
           Clostridium beijerinckii NCIMB 8052|Rep: Integral
           membrane sensor signal transduction histidine kinase
           precursor - Clostridium beijerinckii NCIMB 8052
          Length = 506

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 304 LCMVFINYFSCDFNFFTIFYKLVSDIIFQNDINEFHKRYN 423
           L ++FI YF+  F FF  FY     I    ++N+FH  Y+
Sbjct: 18  LALMFITYFAQAF-FFESFYSYKKTISLVKEVNKFHDLYS 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,897,749
Number of Sequences: 1657284
Number of extensions: 8167127
Number of successful extensions: 18830
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18826
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)