Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0666
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   1.0  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   3.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.7  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 347 SLPFFTN*SVILYFKTILMNSINVTIDINVLYLHIFIICDRL-YTDTN 487
           +LPF  +  + L    I  N I      N+L+ HIF +C  L Y D N
Sbjct: 133 NLPFLEHNLIRLKNCVIYFNRI---FGWNILFGHIFTVCRTLIYIDDN 177


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 438 NTLISIVTFMEFINIVLKYNI 376
           NT I+   F+EFIN ++++++
Sbjct: 94  NTSINGTKFIEFINKLIEFDV 114


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 289 RRICDLCMVFINYF 330
           +R C + +VF+ YF
Sbjct: 74  QRYCSVLLVFLTYF 87


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 289 RRICDLCMVFINYF 330
           +R C + +VF+ YF
Sbjct: 70  QRYCSVLLVFLTYF 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,444
Number of Sequences: 336
Number of extensions: 2601
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)