Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0665
         (388 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.3  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   7.4  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   9.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   9.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   9.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 95   CSKSKHEALKTNNNNI 142
            C   KH  LKT NN +
Sbjct: 2672 CGCGKHPLLKTLNNEL 2687


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 187 LISLV*SAAPLEQVVDVIVVCL 122
           + +L+ S APL    + ++ CL
Sbjct: 323 IATLIQSLAPLNSAANPVIYCL 344


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 52  GYSLSHTAPSGMH 14
           G+  S T+PSG H
Sbjct: 155 GHQDSRTSPSGQH 167


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 52  GYSLSHTAPSGMH 14
           G+  S T+PSG H
Sbjct: 155 GHQDSRTSPSGQH 167


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 52  GYSLSHTAPSGMH 14
           G+  S T+PSG H
Sbjct: 155 GHQDSRTSPSGQH 167


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,101
Number of Sequences: 336
Number of extensions: 1865
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8119573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)