Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0665
         (388 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   0.55 
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   3.9  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   3.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   5.1  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         22   9.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 0.55
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 89  GVCSKSKHEALKTNNNNINHLLERGSRL 172
           G  S S+H   + N  N  HLL R +RL
Sbjct: 309 GKLSSSRHVEAERNARNAQHLLLRANRL 336


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 249 GCIPFCRDNPAQCLRHL 199
           G IPF  ++P+Q LR L
Sbjct: 235 GSIPFIDEDPSQILRQL 251


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 106 QARGAEDKQQ*HQPPAREGQQTT 174
           Q +    +QQ HQPP + G  T+
Sbjct: 120 QQKNQMKRQQQHQPPQQPGPSTS 142


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 98  SKSKHEALKTNNNNINHLLERGSRLHQRNQEGNSR 202
           SKS     ++ + +++    RGSR   R  +  SR
Sbjct: 414 SKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSR 448


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 7  STRAFRWGRCGTSCSP 54
          +TR  RW R  TSC P
Sbjct: 20 TTRGRRWPRPPTSCWP 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,466
Number of Sequences: 2352
Number of extensions: 8764
Number of successful extensions: 71
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29929410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)