Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0665
(388 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 29 1.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 3.5
AF016668-7|AAB66091.3| 471|Caenorhabditis elegans Hypothetical ... 27 3.5
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z68493-12|CAD89734.1| 121|Caenorhabditis elegans Hypothetical p... 27 6.1
U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p... 27 6.1
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p... 27 6.1
U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical p... 27 6.1
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z70782-2|CAA94839.1| 387|Caenorhabditis elegans Hypothetical pr... 26 8.1
AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical ... 26 8.1
AF068710-2|AAC17770.1| 476|Caenorhabditis elegans Hypothetical ... 26 8.1
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 300 SNIIDQQNKKLLQHYPYISDKLNKVSPIK 386
S+II+ KKLLQH + DK+NK+S ++
Sbjct: 639 SDIIEALKKKLLQHRSF-CDKINKLSELE 666
>Z50863-4|CAL36493.1| 412|Caenorhabditis elegans Hypothetical
protein C14H10.2b protein.
Length = 412
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 300 SNIIDQQNKKLLQHYPYISDKLNKVSPIK 386
S+II+ KKLLQH + DK+NK+S ++
Sbjct: 305 SDIIEALKKKLLQHRSF-CDKINKLSELE 332
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 300 SNIIDQQNKKLLQHYPYISDKLNKVSPIK 386
S+II+ KKLLQH + DK+NK+S ++
Sbjct: 639 SDIIEALKKKLLQHRSF-CDKINKLSELE 666
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = -1
Query: 223 SSTMFTPSGVTFLISLV*SAAPLEQVVDVIVVC 125
SS++FTP+G++ L + + PLE+++++ C
Sbjct: 4569 SSSLFTPNGLSQLEVMQRATNPLEKILEIQTHC 4601
>AF016668-7|AAB66091.3| 471|Caenorhabditis elegans Hypothetical
protein F36H9.1 protein.
Length = 471
Score = 27.5 bits (58), Expect = 3.5
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 168 DYTNEI-RKVTPDGVNIVLDCLCRKE-CNHKYSLLKPMGHYILYGSSNIIDQQNKKLLQH 341
+YT ++ RK N L C+C E CN + ++ P+G+ I Y S ++ K +
Sbjct: 358 NYTQDLSRKNMCKIENDWLQCICDTEFCNREQNIEVPLGNVICYLSKRDQSERTKYCIGQ 417
Query: 342 YPYI 353
Y+
Sbjct: 418 KCYL 421
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical
protein F59B2.2 protein.
Length = 460
Score = 27.1 bits (57), Expect = 4.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 61 EDGRKRDRVWCLLQKQARGAEDKQQ*HQPPAREGQQTTPTKS 186
E+GR+R ++ A D + QPPAR G TPT++
Sbjct: 4 EEGRERA---VTVEGDAESMNDGRALVQPPARSGDVITPTRA 42
>Z68493-12|CAD89734.1| 121|Caenorhabditis elegans Hypothetical
protein C33A12.19 protein.
Length = 121
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 107 KHEALKTNNNNINHLLERGSRLH 175
KH A + NN NHLL+ R H
Sbjct: 34 KHRAAHNSINNYNHLLKTSGRNH 56
>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
protein F10G7.10c protein.
Length = 1824
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 62 KTVENVTVFGVCSKSKHEALKTNNNNINHLLERGSRLHQRNQEGNSRWR 208
KT+ +VT F +C KS + + NI E L+ G +WR
Sbjct: 461 KTIFDVTRFLICEKSVDSEISLKSVNI--FKESSRFLNMTTTNGRPKWR 507
>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
protein F10G7.10a protein.
Length = 2025
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 62 KTVENVTVFGVCSKSKHEALKTNNNNINHLLERGSRLHQRNQEGNSRWR 208
KT+ +VT F +C KS + + NI E L+ G +WR
Sbjct: 461 KTIFDVTRFLICEKSVDSEISLKSVNI--FKESSRFLNMTTTNGRPKWR 507
>U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical
protein F10G7.10b protein.
Length = 1884
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 62 KTVENVTVFGVCSKSKHEALKTNNNNINHLLERGSRLHQRNQEGNSRWR 208
KT+ +VT F +C KS + + NI E L+ G +WR
Sbjct: 461 KTIFDVTRFLICEKSVDSEISLKSVNI--FKESSRFLNMTTTNGRPKWR 507
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 22 RWGRCGTSCSPVGEDGRKRDRVWCLLQKQARGAEDKQ 132
+W C SC + G +R +VWC + + +RG ++
Sbjct: 247 QWTECSRSC----DSGERRRQVWCEI-RDSRGKTQRR 278
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 22 RWGRCGTSCSPVGEDGRKRDRVWCLLQKQARGAEDKQ 132
+W C SC + G +R +VWC + + +RG ++
Sbjct: 581 QWTECSRSC----DSGERRRQVWCEI-RDSRGKTQRR 612
>Z70782-2|CAA94839.1| 387|Caenorhabditis elegans Hypothetical
protein R04B5.3 protein.
Length = 387
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 136 IVVCLQRLVLAFGADTKHGHVFD 68
I+ CLQR+V D HVFD
Sbjct: 348 ILTCLQRIVCRLREDMSLAHVFD 370
>AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical
protein Y47H10A.1 protein.
Length = 702
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 237 KECNHKYSLLKPMGHYILYGSSNIIDQQNKKLLQHYPYIS-DKLNKVS 377
+E N ++++ P+GHY++ S+ DQ + LL+ + + DK + +S
Sbjct: 640 REANIRFTV--PLGHYVIVPSTYDPDQDGEFLLRIFTNVDFDKTHALS 685
>AF068710-2|AAC17770.1| 476|Caenorhabditis elegans Hypothetical
protein T06A1.5 protein.
Length = 476
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -3
Query: 251 VVAFLSAETIQHNVYAIWSYLPDFVGVVCCPSRAGG*CYC 132
V F SA ++ + A +SY F + P + G YC
Sbjct: 108 VNGFSSAGGLKFQIMAAYSYKDHFSATISVPKQIGSVAYC 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,784,653
Number of Sequences: 27780
Number of extensions: 175787
Number of successful extensions: 599
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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