Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0664
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.0  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 196 DCRYPVKGGSNNDSN*TLLECSCRC 122
           DCR  V+   N+D+N      S RC
Sbjct: 50  DCRDVVRCDKNSDNNGATRLASVRC 74


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 155 TVVVTAPFHRIPAVGSAALASHPLRFYC 238
           T V     H+I A G   + ++ L FYC
Sbjct: 83  TFVTVLQLHKIFAKGLNVIEANRLFFYC 110


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 155 TVVVTAPFHRIPAVGSAALASHPLRFYC 238
           T V     H+I A G   + ++ L FYC
Sbjct: 83  TFVTVLQLHKIFAKGLNVIEANRLFFYC 110


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 155 TVVVTAPFHRIPAVGSAALASHPLRFYC 238
           T V     H+I A G   + ++ L FYC
Sbjct: 83  TFVTVLQLHKIFAKGLNVIEANRLFFYC 110


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/24 (25%), Positives = 12/24 (50%)
 Frame = +1

Query: 241 KICRRVKSERFSWVYVPGREQDDE 312
           K+C+      F W ++    +D+E
Sbjct: 159 KLCKEANKTAFLWYHIKIDREDEE 182


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -1

Query: 76  ILYICNRC 53
           +LYICN+C
Sbjct: 283 VLYICNQC 290


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,403
Number of Sequences: 336
Number of extensions: 2167
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)