Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0664
(598 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4) i... 63 2e-10
At2g22740.2 68415.m02696 SET domain-containing protein (SUVH6) i... 53 1e-07
At2g22740.1 68415.m02695 SET domain-containing protein (SUVH6) i... 53 1e-07
At2g35160.1 68415.m04313 SET domain-containing protein (SUVH5) i... 48 6e-06
At2g23750.1 68415.m02835 SET domain-containing protein similar t... 43 1e-04
At1g04050.1 68414.m00392 SET domain-containing protein / suppres... 43 1e-04
At4g30860.1 68417.m04381 SET domain-containing protein low simil... 43 2e-04
At3g04380.2 68416.m00464 SET domain-containing protein (SUVR4) n... 43 2e-04
At3g04380.1 68416.m00463 SET domain-containing protein (SUVR4) n... 43 2e-04
At5g43990.2 68418.m05382 SET domain-containing protein identical... 42 4e-04
At5g43990.1 68418.m05383 SET domain-containing protein identical... 42 4e-04
At3g03750.2 68416.m00381 SET domain-containing protein low simil... 42 4e-04
At3g03750.1 68416.m00380 SET domain-containing protein low simil... 42 4e-04
At1g17770.1 68414.m02199 SET domain-containing protein (SUVH7) c... 40 0.002
At1g73100.1 68414.m08452 SET domain-containing protein (SUVH3) i... 39 0.002
At1g05830.1 68414.m00610 trithorax protein, putative / PHD finge... 39 0.002
At3g59960.1 68416.m06692 SET domain-containing protein low simil... 37 0.009
At2g44150.1 68415.m05492 SET domain-containing protein (ASHH3) l... 37 0.012
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 36 0.016
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 36 0.016
At2g05900.1 68415.m00639 SET domain-containing protein / YDG/SRA... 36 0.016
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 36 0.016
At4g27910.1 68417.m04006 PHD finger protein-related / SET domain... 36 0.027
At2g31650.1 68415.m03864 trithorax 1 (ATX-1) (TRX1) identical to... 36 0.027
At1g02580.1 68414.m00209 maternal embryogenesis control protein ... 34 0.063
At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) l... 33 0.14
At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) l... 33 0.14
At5g42400.1 68418.m05162 SET domain-containing protein (TXR7) co... 32 0.25
At4g13460.1 68417.m02102 SET domain-containing protein (SUVH9) i... 32 0.25
At2g33290.1 68415.m04080 SET domain-containing protein (SUVH2) i... 31 0.44
At2g24740.1 68415.m02955 SET domain-containing protein (SUVH8) i... 31 0.58
At5g53430.1 68418.m06640 PHD finger family protein / SET domain-... 30 1.0
At5g04950.1 68418.m00524 nicotianamine synthase, putative simila... 27 7.2
At1g27020.1 68414.m03294 expressed protein 27 7.2
At2g40570.1 68415.m05005 initiator tRNA phosphoribosyl transfera... 27 9.5
>At5g13960.1 68418.m01632 SET domain-containing protein (SUVH4)
identical to SUVH4 [Arabidopsis thaliana] GI:13517749;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH4 (SUVH4) GI:13517748
Length = 624
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/58 (50%), Positives = 39/58 (67%)
Frame = -2
Query: 429 QLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
+ CIDA S G+ ARF+NHSCE + V + H+D+RL VVLFA +I P + LT+D
Sbjct: 535 EFCIDAGSTGNFARFINHSCEPNLFVQCVLSSHQDIRLARVVLFAADNISPMQELTYD 592
>At2g22740.2 68415.m02696 SET domain-containing protein (SUVH6)
identical to SUVH6 [Arabidopsis thaliana] GI:13517753;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain
Length = 790
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = -2
Query: 471 LGT--GPPLEQCADKTQLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLF 298
LGT G + + + + IDAAS G+ RF+NHSC + A V H D R+P V+ F
Sbjct: 685 LGTQAGRSMAEGDESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSRIPHVMFF 744
Query: 297 ATRDIHPGEPLTFD 256
A +I P + L +D
Sbjct: 745 AQDNIPPLQELCYD 758
>At2g22740.1 68415.m02695 SET domain-containing protein (SUVH6)
identical to SUVH6 [Arabidopsis thaliana] GI:13517753;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain
Length = 790
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = -2
Query: 471 LGT--GPPLEQCADKTQLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLF 298
LGT G + + + + IDAAS G+ RF+NHSC + A V H D R+P V+ F
Sbjct: 685 LGTQAGRSMAEGDESSGFTIDAASKGNVGRFINHSCSPNLYAQNVLYDHEDSRIPHVMFF 744
Query: 297 ATRDIHPGEPLTFD 256
A +I P + L +D
Sbjct: 745 AQDNIPPLQELCYD 758
>At2g35160.1 68415.m04313 SET domain-containing protein (SUVH5)
identical to SUVH5 [Arabidopsis thaliana] GI:13517751;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH5 (SUVH5) GI:13517750
Length = 794
Score = 47.6 bits (108), Expect = 6e-06
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
I+AA G+ RF+NHSC + A V H ++R+P ++ FA +I P + L++D
Sbjct: 708 INAAQKGNIGRFINHSCSPNLYAQDVLYDHEEIRIPHIMFFALDNIPPLQELSYD 762
>At2g23750.1 68415.m02835 SET domain-containing protein similar to
SP|O60016 Cryptic loci regulator 4 (Histone-lysine
N-methyltransferase) {Schizosaccharomyces pombe};
contains Pfam profile PF00856: SET domain
Length = 203
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = -2
Query: 438 DKTQLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTF 259
++ IDA ++G+ +RF+NHSC + +V + L + L+A+ DI GE +T
Sbjct: 115 EELDYAIDATTHGNISRFINHSCSPNLVNHQVIVESMESPLAHIGLYASMDIAAGEEITR 174
Query: 258 D 256
D
Sbjct: 175 D 175
>At1g04050.1 68414.m00392 SET domain-containing protein / suppressor
of variegation related 1 (SUVR1) identical to suppressor
of variegation related 1 [Arabidopsis thaliana]
GI:15004614; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA trithorax 3
(ATX3) partial cds GI:15217142
Length = 630
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -2
Query: 426 LCIDAASYGSAARFMNHSC-EASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFDSA 250
LC+D YG+ +RF+NH C +A+ + V D + F TRDI E L +D
Sbjct: 533 LCLDGMFYGNISRFLNHRCLDANLIEIPVQVETPDQHYYHLAFFTTRDIEAMEELAWDYG 592
Query: 249 TNF 241
+F
Sbjct: 593 IDF 595
>At4g30860.1 68417.m04381 SET domain-containing protein low
similarity to IL-5 promoter REII-region-binding protein
[Homo sapiens] GI:12642795; contains Pfam profile
PF00856: SET domain
Length = 497
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = -2
Query: 444 CADKTQLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPL 265
C + IDA G+A+RF+NHSC + + + + R V +FA R I GEPL
Sbjct: 383 CEIQKDFTIDATFKGNASRFLNHSCNPN-CVLEKWQVEGETR---VGVFAARQIEAGEPL 438
Query: 264 TFD 256
T+D
Sbjct: 439 TYD 441
>At3g04380.2 68416.m00464 SET domain-containing protein (SUVR4)
nearly identical to Su(VAR)3-9-related protein 4
[Arabidopsis thaliana] GI:17066863; contains Pfam
profiles PF00856: SET domain, PF05033: Pre-SET motif;
identical to cDNA Su(VAR)3-9-related protein 4 (SUVR4)
GI:17066862, which is an SET domain protein similar to
Drosophila SU(VAR)3-9
Length = 465
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 438 DKTQLCIDAASYGSAARFMNHSCE-ASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLT 262
D+ LC+DA G+ ARF+NH CE A+ + + D + F RD+ + LT
Sbjct: 345 DEEALCLDATICGNVARFINHRCEDANMIDIPIEIETPDRHYYHIAFFTLRDVKAMDELT 404
Query: 261 FDSATNF 241
+D +F
Sbjct: 405 WDYMIDF 411
>At3g04380.1 68416.m00463 SET domain-containing protein (SUVR4)
nearly identical to Su(VAR)3-9-related protein 4
[Arabidopsis thaliana] GI:17066863; contains Pfam
profiles PF00856: SET domain, PF05033: Pre-SET motif;
identical to cDNA Su(VAR)3-9-related protein 4 (SUVR4)
GI:17066862, which is an SET domain protein similar to
Drosophila SU(VAR)3-9
Length = 492
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 438 DKTQLCIDAASYGSAARFMNHSCE-ASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLT 262
D+ LC+DA G+ ARF+NH CE A+ + + D + F RD+ + LT
Sbjct: 372 DEEALCLDATICGNVARFINHRCEDANMIDIPIEIETPDRHYYHIAFFTLRDVKAMDELT 431
Query: 261 FDSATNF 241
+D +F
Sbjct: 432 WDYMIDF 438
>At5g43990.2 68418.m05382 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 740
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 438 DKTQLCIDAASYGSAARFMNHSC-EASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLT 262
D L ++ YG+ +RF+NH C +A+ + V D + F TR+I E LT
Sbjct: 639 DDKALSLEGTHYGNISRFINHRCLDANLIEIPVHAETTDSHYYHLAFFTTREIDAMEELT 698
Query: 261 FDSATNFGQ 235
+D F Q
Sbjct: 699 WDYGVPFNQ 707
>At5g43990.1 68418.m05383 SET domain-containing protein identical to
SET domain protein SUVR2 [Arabidopsis thaliana]
GI:15290521; contains Pfam profiles PF00856: SET domain,
PF05033: Pre-SET motif; identical to cDNA SET domain
protein SUVR2 GI:15290520
Length = 717
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 438 DKTQLCIDAASYGSAARFMNHSC-EASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLT 262
D L ++ YG+ +RF+NH C +A+ + V D + F TR+I E LT
Sbjct: 616 DDKALSLEGTHYGNISRFINHRCLDANLIEIPVHAETTDSHYYHLAFFTTREIDAMEELT 675
Query: 261 FDSATNFGQ 235
+D F Q
Sbjct: 676 WDYGVPFNQ 684
>At3g03750.2 68416.m00381 SET domain-containing protein low
similarity to G9a [Homo sapiens] GI:287865; contains
Pfam profiles PF00856: SET domain, PF05033: Pre-SET
motif
Length = 354
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTF 259
IDA G+ ARF+NHSC+ + V R LP + FA +DI E L+F
Sbjct: 268 IDATRIGNVARFINHSCDGGNLST-VLLRSSGALLPRLCFFAAKDIIAEEELSF 320
>At3g03750.1 68416.m00380 SET domain-containing protein low
similarity to G9a [Homo sapiens] GI:287865; contains
Pfam profiles PF00856: SET domain, PF05033: Pre-SET
motif
Length = 338
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/54 (40%), Positives = 29/54 (53%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTF 259
IDA G+ ARF+NHSC+ + V R LP + FA +DI E L+F
Sbjct: 252 IDATRIGNVARFINHSCDGGNLST-VLLRSSGALLPRLCFFAAKDIIAEEELSF 304
>At1g17770.1 68414.m02199 SET domain-containing protein (SUVH7)
contains Pfam profiles: PF05033: Pre-SET motif, PF00856
SET domain; identical to cDNA SUVH7 (SUVH7) GI:13517754
Length = 693
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = -2
Query: 432 TQLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
TQ+ I A G+ RFMNHSC + + +R L+ LFA + I P LT+D
Sbjct: 600 TQVLISAKEKGNVGRFMNHSCSPNVFWQPIEYENRGDVYLLIGLFAMKHIPPMTELTYD 658
>At1g73100.1 68414.m08452 SET domain-containing protein (SUVH3)
identical to SUVH3 [Arabidopsis thaliana] GI:13517747;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH3 (SUVH3) GI:14625477
Length = 669
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -2
Query: 426 LCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
L I A +G+ ARFMNHSC + V + + FA R I P LT+D
Sbjct: 580 LLISAKKFGNVARFMNHSCSPNVFWQPVIREGNGESVIHIAFFAMRHIPPMAELTYD 636
>At1g05830.1 68414.m00610 trithorax protein, putative / PHD finger
family protein / SET domain-containing protein similar to
trithorax-like protein 1 [Arabidopsis thaliana]
GI:12659210; contains Pfam domain, PF00628: PHD-finger
and PF00856: SET domain
Length = 1056
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
IDA GS A +NHSCE + + RV + + D +++FA RD+ E LT+D
Sbjct: 958 IDATRTGSIAHLINHSCEPNCYS-RVISVNGDEH---IIIFAKRDVAKWEELTYD 1008
>At3g59960.1 68416.m06692 SET domain-containing protein low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain
Length = 352
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = -2
Query: 444 CADKTQLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPL 265
C + IDA G+ +R++NHSC + ++ + + R + +FATR I+ GE L
Sbjct: 168 CQINWNMVIDATHKGNKSRYINHSCSPN-TEMQKWIIDGETR---IGIFATRFINKGEQL 223
Query: 264 TFD 256
T+D
Sbjct: 224 TYD 226
>At2g44150.1 68415.m05492 SET domain-containing protein (ASHH3) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 3 (ASHH3)
partial cds GI:15488419
Length = 363
Score = 36.7 bits (81), Expect = 0.012
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = -2
Query: 444 CADKTQLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPL 265
C + IDA G+ +R++NHSC + ++ + + R + +FATR I GE L
Sbjct: 173 CEITRDMVIDATHKGNKSRYINHSCNPN-TQMQKWIIDGETR---IGIFATRGIKKGEHL 228
Query: 264 TFD 256
T+D
Sbjct: 229 TYD 231
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 36.3 bits (80), Expect = 0.016
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -2
Query: 426 LCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
L I A + G+ ARFMNHSC + V + V FA I P LT+D
Sbjct: 581 LIISAKNVGNVARFMNHSCSPNVFWQPVSYENNSQLFVHVAFFAISHIPPMTELTYD 637
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 36.3 bits (80), Expect = 0.016
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -2
Query: 426 LCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
L I A + G+ ARFMNHSC + V + V FA I P LT+D
Sbjct: 581 LIISAKNVGNVARFMNHSCSPNVFWQPVSYENNSQLFVHVAFFAISHIPPMTELTYD 637
>At2g05900.1 68415.m00639 SET domain-containing protein / YDG/SRA
domain-containing protein contains Pfam profiles
PF00856: SET domain, PF05033: Pre-SET motif, PF02182:
YDG/SRA domain
Length = 312
Score = 36.3 bits (80), Expect = 0.016
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = -2
Query: 450 EQCADKTQLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGE 271
E+ + + L I A G+ ARFMNHSC + + L + FA + I P
Sbjct: 224 EKLSVSSSLVISAKKSGNVARFMNHSCSPNVFWQSIAREQNGLWCLYIGFFAMKHIPPLT 283
Query: 270 PLTFDSATNFGQ*KR 226
L +D + G K+
Sbjct: 284 ELRYDYGKSRGGGKK 298
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 36.3 bits (80), Expect = 0.016
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
IDA + G+ RF+NHSCE + + V +F+ +D+ G+ LTFD
Sbjct: 1091 IDAGAKGNLGRFINHSCEPNCRTEKWMVNGE----ICVGIFSMQDLKKGQELTFD 1141
>At4g27910.1 68417.m04006 PHD finger protein-related / SET
domain-containing protein (TX4) nearly identical over 285
amino acids to trithorax 4 [Arabidopsis thaliana]
GI:16118405; contains Pfam profiles PF00856: SET domain,
PF00855: PWWP domain; identical to cDNA trithorax 4 (TX4)
partial cds GI:16118404
Length = 1027
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -2
Query: 429 QLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
++ +DA G+ AR +NHSC + A + + R +VL A ++ GE LT+D
Sbjct: 946 EVVVDATDKGNIARLINHSCTPNCYARIMSVGDEESR---IVLIAKANVAVGEELTYD 1000
>At2g31650.1 68415.m03864 trithorax 1 (ATX-1) (TRX1) identical to
trithorax-like protein 1 GI:12659210 from [Arabidopsis
thaliana]; characterized in Alvarez-Venegas R,et al,
ATX-1, an Arabidopsis Homolog of Trithorax, Activates
Flower Homeotic Genes.(Curr Biol. 2003 Apr
15;13(8):627-37 PMID: 12699618); contains Pfam profiles
PF00856: SET domain, PF00855: PWWP domain, PF00628,
PHD-finger; identical to cDNA trithorax-like protein 1
(TRX1) GI:12659209
Length = 1062
Score = 35.5 bits (78), Expect = 0.027
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
IDA GS A +NHSC + + RV T + D +++FA R I E LT+D
Sbjct: 964 IDATRTGSIAHLINHSCVPNCYS-RVITVNGDEH---IIIFAKRHIPKWEELTYD 1014
>At1g02580.1 68414.m00209 maternal embryogenesis control protein /
MEDEA (MEA) nearly identical to MEDEA GB:AAC39446
GI:3089625 from [Arabidopsis thaliana]; contains Pfam
profile PF00856: SET domain
Length = 689
Score = 34.3 bits (75), Expect = 0.063
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = -2
Query: 429 QLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
QL IDA G+ +F+NHS + A + R D R + LFA R I GE L FD
Sbjct: 604 QLEIDARRKGNEFKFLNHSARPNCYAKLMIVR-GDQR---IGLFAERAIEEGEELFFD 657
>At1g76710.2 68414.m08928 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
IDA GS ARF+NHSC + R + ++R V +FA I P L +D
Sbjct: 154 IDATKKGSLARFINHSCRPN-CETRKWNVLGEVR---VGIFAKESISPRTELAYD 204
>At1g76710.1 68414.m08927 SET domain-containing protein (ASHH1) low
similarity to huntingtin interacting protein 1 [Homo
sapiens] GI:12697196; contains Pfam profile PF00856: SET
domain; identical to cDNA ASH1-like protein 1 (ASHH1)
partial cds GI:15488417
Length = 492
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
IDA GS ARF+NHSC + R + ++R V +FA I P L +D
Sbjct: 154 IDATKKGSLARFINHSCRPN-CETRKWNVLGEVR---VGIFAKESISPRTELAYD 204
>At5g42400.1 68418.m05162 SET domain-containing protein (TXR7)
contains Pfam profile PF00856: SET domain
Length = 1423
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
+DA G ARF+NHSCE + + + + ++A R I GE ++++
Sbjct: 1331 LDATKRGGIARFINHSCEPNCYTKIISVEGK----KKIFIYAKRHIDAGEEISYN 1381
>At4g13460.1 68417.m02102 SET domain-containing protein (SUVH9)
identical to SUVH9 [Arabidopsis thaliana] GI:13517759;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH9 (SUVH9) GI:13517758
Length = 650
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
+D + + A +++HS + + V H L P V+LFA +I P L+ D
Sbjct: 581 MDVSKMRNVACYISHSTDPNVIVQFVLHDHNSLMFPRVMLFAAENIPPMTELSLD 635
>At2g33290.1 68415.m04080 SET domain-containing protein (SUVH2)
identical to SUVH2 [Arabidopsis thaliana] GI:13517745;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH2 (SUVH2) GI:13517744
Length = 651
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 420 IDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
+D + + A +++HS E + V H L P V+LFA +I P L+ D
Sbjct: 582 MDVSRMRNVACYISHSKEPNVMVQFVLHDHNHLMFPRVMLFALENISPLAELSLD 636
>At2g24740.1 68415.m02955 SET domain-containing protein (SUVH8)
identical to SUVH8 [Arabidopsis thaliana] GI:13517757;
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain
Length = 755
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -2
Query: 432 TQLCIDAASYGSAARFMNHSCEASAAAVRV-FTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
TQ+ I A G+ RFMNH+C + + + + + LFA + I P LT+D
Sbjct: 662 TQVLISAKEKGNVGRFMNHNCWPNVFWQPIEYDDNNGHIYVRIGLFAMKHIPPMTELTYD 721
>At5g53430.1 68418.m06640 PHD finger family protein / SET
domain-containing protein (TX5) contains Pfam domain,
PF00628: PHD-finger and PF00856: SET domain; identical to
cDNA trithorax 5 (TX5) partial cds GI:16118406
Length = 1043
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -2
Query: 429 QLCIDAASYGSAARFMNHSCEASAAAVRVFTRHRDLRLPLVVLFATRDIHPGEPLTFD 256
++ +DA G+ AR +NHSC + A R+ + D +VL A + E LT+D
Sbjct: 962 EVVVDATEKGNIARLINHSCMPNCYA-RIMSVGDD--ESRIVLIAKTTVASCEELTYD 1016
>At5g04950.1 68418.m00524 nicotianamine synthase, putative similar
to nicotianamine synthase [Lycopersicon
esculentum][GI:4753801], nicotianamine synthase 2
[Hordeum vulgare][GI:4894912]
Length = 320
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 569 VARRLSW-VTPGFSQSRRCKTRPVNCNTTH 483
+AR+L TPG + +R C P NC+ H
Sbjct: 272 IARKLGGPTTPGVNGTRGCMFMPCNCSKIH 301
>At1g27020.1 68414.m03294 expressed protein
Length = 308
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 529 WENPGVTQLNRLATHPPFASW 591
WE P T N+LA FA+W
Sbjct: 163 WEKPTSTDFNQLAKESEFAAW 183
>At2g40570.1 68415.m05005 initiator tRNA phosphoribosyl transferase
family protein contains Pfam profile: PF04179 initiator
tRNA phosphoribosyl transferase
Length = 521
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 262 SERFSWVYVPGREQDDERQAQ 324
S FSW Y+PG D+E A+
Sbjct: 258 SSEFSWNYIPGAGDDEESWAR 278
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,848,525
Number of Sequences: 28952
Number of extensions: 181677
Number of successful extensions: 452
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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