Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0663
(412 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 113 4e-26
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 112 9e-26
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 110 4e-25
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 110 4e-25
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 110 4e-25
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 110 4e-25
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 110 4e-25
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 110 4e-25
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 110 4e-25
12_02_1282 + 27528159-27529148,27529549-27529614 109 8e-25
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 58 3e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 50 5e-07
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 47 7e-06
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 46 2e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 42 2e-04
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 39 0.001
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 39 0.001
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 37 0.005
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 34 0.051
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 29 1.1
08_02_1326 - 26158279-26159712 28 2.5
12_01_0843 + 7891622-7892524 28 3.3
02_05_0477 - 29339649-29340253,29340880-29341492 27 4.4
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 27 4.4
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 27 5.8
11_05_0081 - 18924353-18924462,18925068-18925187,18925569-189260... 27 7.7
03_05_0269 - 22545925-22546554,22546663-22547010,22547447-22547797 27 7.7
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 113 bits (273), Expect = 4e-26
Identities = 52/74 (70%), Positives = 58/74 (78%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GT 241
M DE++ +V DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 242 QQNKFLTLKYPIEH 283
+ LTLKYPIEH
Sbjct: 61 AKRGILTLKYPIEH 74
Score = 84.2 bits (199), Expect = 4e-17
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWHHTFYNEL V P++HP+LLTEAPLNPKAN
Sbjct: 74 HGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKAN 116
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 112 bits (270), Expect = 9e-26
Identities = 51/74 (68%), Positives = 58/74 (78%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GT 241
M +E++ +V DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 242 QQNKFLTLKYPIEH 283
+ LTLKYPIEH
Sbjct: 61 SKRGILTLKYPIEH 74
Score = 84.6 bits (200), Expect = 3e-17
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWHHTFYNEL V P+EHP+LLTEAP+NPKAN
Sbjct: 74 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKAN 116
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 110 bits (265), Expect = 4e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 84.2 bits (199), Expect = 4e-17
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL V P+EHP LLTEAPLNPKAN
Sbjct: 75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKAN 117
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 110 bits (265), Expect = 4e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 110 bits (265), Expect = 4e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 86.2 bits (204), Expect = 9e-18
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL V P+EHPILLTEAPLNPKAN
Sbjct: 75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 110 bits (265), Expect = 4e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 110 bits (265), Expect = 4e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWHHTFYNEL V P+EHPILLTEAPLNPKAN
Sbjct: 75 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 110 bits (265), Expect = 4e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 110 bits (265), Expect = 4e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 109 bits (262), Expect = 8e-25
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
+++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.4 bits (202), Expect = 2e-17
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 58.0 bits (134), Expect = 3e-09
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = +1
Query: 214 GLLCKEMRHTAK*VPDPQIPHRTHESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAP 393
G C ++RH D P T+ +WDDM +IW H FY+EL V P E ILLT+ P
Sbjct: 56 GAACADLRHQL----DVSYPV-TNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPP 110
Query: 394 LNPKAN 411
LNP N
Sbjct: 111 LNPVKN 116
Score = 44.0 bits (99), Expect = 5e-05
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFTGDDAPRAVFPSIVGRP 178
+V DNG+G K GF G++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 50.4 bits (115), Expect = 5e-07
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSI 166
+EV+A+V+D GS CKAG+ GDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
Score = 46.0 bits (104), Expect = 1e-05
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 295 TNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLN 399
T+WD ++NIW+H F L + P+EHP+L+ E N
Sbjct: 144 TDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTN 178
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 46.8 bits (106), Expect = 7e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 262 PQIPHRTHESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLN 399
P I +F +WD ++NIW+H F L + P+EHP+L+ E N
Sbjct: 88 PVISPMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVEPSTN 133
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1
Query: 298 NWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNP 402
NWD ME W +N L P++H LLTE+PL P
Sbjct: 98 NWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTP 132
Score = 33.1 bits (72), Expect = 0.089
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 83 ALVVDNGSGMCKAGFTGDDAPRAVFPSIV 169
A+V+DNG+G K GF G+ P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 41.9 bits (94), Expect = 2e-04
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLN 399
H +WD ME W +N L P+EH LLT++P++
Sbjct: 92 HGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDSPVS 130
Score = 34.3 bits (75), Expect = 0.038
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 83 ALVVDNGSGMCKAGFTGDDAPRAVFPSIV 169
A+V+DNG+G K GF+G+ P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 39.1 bits (87), Expect = 0.001
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFTGDDAPRAVFPSIVGRP 178
+V+DNG G+ KAGF GD P AV P+ + +P
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP 38
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 298 NWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKA 408
N + +W N L V P +LL E NP A
Sbjct: 73 NQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPA 109
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 39.1 bits (87), Expect = 0.001
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQ 187
+V+DNG+ + G+ G+ PR F +IV RPRH+
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHR 55
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 289 SFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLN 399
+F +WD ++NIW+H F P+EHP+L+ E N
Sbjct: 178 TFIDWDIVDNIWNHAF----SFYPEEHPMLIVEPSTN 210
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 33.9 bits (74), Expect = 0.051
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 289 SFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLN 399
+F +WD ++NIW+H F +EHP+L+ E N
Sbjct: 79 TFIDWDIVDNIWNHAF----SFYAEEHPMLIVEPSTN 111
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 183 WRGLPTIEGNTARGASSPVKPALHIPEPLSTTNAATSSSH 64
WR P + + ARG S P++ AL +P++ +++ H
Sbjct: 251 WRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEH 290
>08_02_1326 - 26158279-26159712
Length = 477
Score = 28.3 bits (60), Expect = 2.5
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = -1
Query: 253 LILLCASSLYIRVLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAIVY 92
L L+C +++ LLSH+ H L + + GKH A S S + L + A+ Y
Sbjct: 51 LCLVCLFTVHYPSLLSHSFH--LSSAAAAANGKHRAASRSSHRSLLGSSAAVAY 102
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAV 154
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIV 169
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>01_06_0293 - 28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +1
Query: 160 LDRGKAPPSRRDGRYGTKGLLCKEMRHTAK*VPDPQIPHRTHESFTNWDDMENIW 324
LD G PP RDG + KE + +P + ++T E W E +W
Sbjct: 1357 LDAGSTPPIARDGE---SMEMMKEFYSGDRILPKKPVYYKTDELPELWFSAEQVW 1408
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 92 VDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 223
++N S K GF + V +++G P H G + G+ K S+
Sbjct: 322 IENLSSSQKKGFFKPKREKDVLSTVLGTPEHGGRVRGVSSKMSW 365
>11_05_0081 - 18924353-18924462,18925068-18925187,18925569-18926086,
18927392-18927471,18927680-18927782,18928084-18928295,
18928392-18929210,18929331-18929444,18929935-18929983,
18930115-18930271,18930354-18930807,18930938-18931147
Length = 981
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 232 SLYIRVLLSHTDHHALMAGPSHDRGKHCARSIISCEAG 119
++Y R+ L+H D + +G D KH + C G
Sbjct: 891 NVYKRIALNHRDQRVVASGDLADGDKHDQSFEVECSIG 928
>03_05_0269 - 22545925-22546554,22546663-22547010,22547447-22547797
Length = 442
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 183 WRGLPTIEGNTARGASSPVKPALHIPEPLSTTN 85
WR P + + A+G P++ AL +PL+T +
Sbjct: 210 WRHTPWLGAHAAKGPVRPLRRALQGLDPLTTAS 242
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,162,377
Number of Sequences: 37544
Number of extensions: 314618
Number of successful extensions: 873
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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