Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0663
(412 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 132 8e-32
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 2e-30
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 2e-30
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 5e-30
SB_56| Best HMM Match : Actin (HMM E-Value=0) 126 5e-30
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 1e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 9e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 58 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 50 1e-06
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.030
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 33 0.069
SB_18611| Best HMM Match : IBN_N (HMM E-Value=7.4e-06) 32 0.16
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.85
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 30 0.85
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_18334| Best HMM Match : CSE2 (HMM E-Value=4.9) 27 6.0
SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 132 bits (320), Expect = 8e-32
Identities = 61/74 (82%), Positives = 64/74 (86%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GT 241
MCD++VAALVVDNGSGMCKAGF GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 QQNKFLTLKYPIEH 283
+ LTLKYPIEH
Sbjct: 61 SKRGILTLKYPIEH 74
Score = 87.4 bits (207), Expect = 4e-18
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H TNWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 128 bits (309), Expect = 2e-30
Identities = 60/74 (81%), Positives = 63/74 (85%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GT 241
M D+E+AALVVDNGSGMCKAGF GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 QQNKFLTLKYPIEH 283
+ LTLKYPIEH
Sbjct: 61 SKRGILTLKYPIEH 74
Score = 87.4 bits (207), Expect = 4e-18
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H TNWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 128 bits (309), Expect = 2e-30
Identities = 58/74 (78%), Positives = 63/74 (85%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GT 241
M D+++AALV+DNGSGMCKAGF GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 242 QQNKFLTLKYPIEH 283
+ LTLKYPIEH
Sbjct: 61 SKRGILTLKYPIEH 74
Score = 87.4 bits (207), Expect = 4e-18
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H TNWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 116
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 126 bits (305), Expect = 5e-30
Identities = 58/72 (80%), Positives = 62/72 (86%)
Frame = +2
Query: 68 DEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQ 247
D++VAALV+DNGSGMCKAGF GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV +
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 248 NKFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 62 RGILTLKYPIEH 73
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTF 336
H TNWDDME I TF
Sbjct: 73 HGIVTNWDDMEKIMFETF 90
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 126 bits (305), Expect = 5e-30
Identities = 59/72 (81%), Positives = 62/72 (86%)
Frame = +2
Query: 68 DEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQ 247
++EVAALVVDNGSGMCKAGF GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV +
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 248 NKFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 62 RGILTLKYPIEH 73
Score = 87.4 bits (207), Expect = 4e-18
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H TNWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 73 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 125 bits (302), Expect = 1e-29
Identities = 58/72 (80%), Positives = 62/72 (86%)
Frame = +2
Query: 68 DEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQ 247
+++VAALVVDNGSGMCKAGF GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV +
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 248 NKFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 62 RGILTLKYPIEH 73
Score = 87.4 bits (207), Expect = 4e-18
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H TNWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 73 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 115
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 9e-10
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQ 187
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 40.7 bits (91), Expect = 5e-04
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 319 IWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
+W H F ++L V ++ P+LLTEAPLNPK N
Sbjct: 2131 MWEHAF-DQLRVRGEDFPVLLTEAPLNPKMN 2160
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 58.0 bits (134), Expect = 3e-09
Identities = 26/39 (66%), Positives = 28/39 (71%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQ 187
E LV+D GS M K GF GDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 49.6 bits (113), Expect = 1e-06
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +2
Query: 56 FKMCDEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVG 202
FK+ A+V+DNG G+ K GF GD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 48.4 bits (110), Expect = 2e-06
Identities = 18/39 (46%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +1
Query: 298 NWDDMENIWHHTF-YNELHVTPKEHPILLTEAPLNPKAN 411
NWDDM+++W +TF +++++ P+ +LLTE PLNP N
Sbjct: 81 NWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKN 119
Score = 47.2 bits (107), Expect = 5e-06
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Frame = +2
Query: 80 AALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVKR*GTQQNK 253
+ +V DNG+G K G+ G + P +FPS+VGRP R + + KD V +Q
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 254 FLTLKYPIEH---MNHSLTGMTW-RIFGIIPSTMNYMSPPKNTPSCLLKLPSTP 403
L + YP+++ N W FG S MN P+NT L + P P
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFG--ESKMNI--DPRNTKVLLTEPPLNP 116
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.030
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -1
Query: 184 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 68
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 33.5 bits (73), Expect = 0.069
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 364 EHPILLTEAPLNPKAN 411
+HP+LLTEAPLNP+ N
Sbjct: 126 QHPVLLTEAPLNPRRN 141
>SB_18611| Best HMM Match : IBN_N (HMM E-Value=7.4e-06)
Length = 421
Score = 32.3 bits (70), Expect = 0.16
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -1
Query: 286 HVFDGVFEGQELILLCASSLYIRVLLSHTDHHALMAGPSH 167
H+ + V +LI + SS +I ++ S + HH +M+ PSH
Sbjct: 171 HIIEAVISAPDLIRVMPSSSHI-IIKSWSHHHQVMSSPSH 209
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.9 bits (64), Expect = 0.85
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 159 GNTARGASSPVKPALHIPEPLSTT 88
GNT R P KPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.9 bits (64), Expect = 0.85
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 159 GNTARGASSPVKPALHIPEPLSTT 88
GNT R P KPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -2
Query: 246 CCVPHLFT*ESFCPIPTITP*WRGLPTIEGNTARGASSPVKPAL 115
C PH + SF P TP RG PT +RG +PVK A+
Sbjct: 1301 CTTPHRSS-ASFGPNRVSTP-KRGSPTSRNTPSRGLRTPVKTAM 1342
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 159 GNTARGASSPVKPALHIPEPLSTT 88
GNT R P KP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 256 ELILLCASSLYIRVLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAIVYY 89
+L+ L L R++ S T H + G H G H ++ EAGL I+ +
Sbjct: 25 DLVKLEHVYLIYRLVFSATIEHEYLGGRYHSIGAHISQETSRHEAGLTQISRIIRF 80
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 59 KMCDEEVAALVVDNG-SGMCKAGFTGD 136
++CD++ + +N MCKAG+TGD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -3
Query: 227 LHKSPFVPYRPSRLDGGAFPRSRETLREEHHLL*SRPCTYRSHCLLPTRQLLRR 66
L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 134 LPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_18334| Best HMM Match : CSE2 (HMM E-Value=4.9)
Length = 296
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 85 VGSRQWLRYVQGRLHRR*CSSRSVSLD 165
VGSR+W R++ RR SS VSLD
Sbjct: 72 VGSREWWRHIDNLSQRR-RSSAKVSLD 97
>SB_18016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 573
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 85 VGSRQWLRYVQGRLHRR*CSSRSVSLD 165
VGSR+W R++ RR SS VSLD
Sbjct: 106 VGSREWWRHIDNLSQRR-RSSAKVSLD 131
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 92 VDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQG 190
V+N + +CK GFTG D + + RH G
Sbjct: 482 VNNYTCVCKPGFTGSDCSVDILECLSNPCRHGG 514
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 159 GNTARGASSPVKPALHIPEPLSTT 88
GNT R KPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 159 GNTARGASSPVKPALHIPEPLSTT 88
GNT R P KP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,776,024
Number of Sequences: 59808
Number of extensions: 348482
Number of successful extensions: 960
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 752487277
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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