Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0663
(412 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 110 3e-25
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 110 3e-25
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 110 3e-25
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 110 3e-25
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 110 3e-25
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 110 3e-25
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 106 7e-24
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 106 7e-24
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 106 7e-24
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 103 6e-23
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 81 4e-16
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 79 9e-16
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 64 3e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 56 1e-08
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 55 2e-08
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 44 3e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 41 3e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 38 0.003
At2g38460.1 68415.m04723 iron transporter-related contains tran... 29 1.6
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.0
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 28 2.1
At5g19400.1 68418.m02312 expressed protein 27 3.7
At5g03570.1 68418.m00315 iron-responsive transporter-related sim... 27 3.7
At4g11320.1 68417.m01828 cysteine proteinase, putative contains ... 27 3.7
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 3.7
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 4.9
At4g38310.1 68417.m05414 galactosyl transferase GMA12/MNN10 fami... 27 4.9
At3g48860.2 68416.m05337 expressed protein 27 4.9
At3g48860.1 68416.m05336 expressed protein 27 4.9
At3g26744.1 68416.m03344 basix helix-loop-helix (bHLH) family pr... 27 4.9
At3g20980.1 68416.m02653 hypothetical protein 27 4.9
At1g58440.1 68414.m06648 squalene monooxygenase, putative / squa... 27 4.9
At5g38560.1 68418.m04662 protein kinase family protein contains ... 26 8.6
At1g49840.1 68414.m05588 expressed protein contains Pfam profile... 26 8.6
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.4 bits (202), Expect = 1e-17
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWHHTFYNEL V P+EHPILLTEAPLNPKAN
Sbjct: 75 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.4 bits (202), Expect = 1e-17
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL V P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 110 bits (265), Expect = 3e-25
Identities = 51/71 (71%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ LV DNG+GM KAGF GDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV +
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.8 bits (203), Expect = 1e-17
Identities = 35/43 (81%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWHHTFYNEL V P+EHPILLTEAPLNPKAN
Sbjct: 75 HGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 106 bits (254), Expect = 7e-24
Identities = 47/71 (66%), Positives = 55/71 (77%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
+++ +V DNG+GM KAGF GDDAPRAVFPS+VGRPRH GVMVGM QKD+YV +
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.4 bits (202), Expect = 1e-17
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL + P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 106 bits (254), Expect = 7e-24
Identities = 47/71 (66%), Positives = 55/71 (77%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
+++ +V DNG+GM KAGF GDDAPRAVFPS+VGRPRH GVMVGM QKD+YV +
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.4 bits (202), Expect = 1e-17
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL + P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 106 bits (254), Expect = 7e-24
Identities = 47/71 (66%), Positives = 55/71 (77%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
+++ +V DNG+GM KAGF GDDAPRAVFPS+VGRPRH GVMVGM QKD+YV +
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 KFLTLKYPIEH 283
LTLKYPIEH
Sbjct: 65 GILTLKYPIEH 75
Score = 85.4 bits (202), Expect = 1e-17
Identities = 33/43 (76%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL + P+EHP+LLTEAPLNPKAN
Sbjct: 75 HGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 103 bits (246), Expect = 6e-23
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
+E A+V DNG+GM KAGF GDDAPRAVFPS+VGRPRH+GVMVGM +KD++V +
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 251 KFLTLKYPIEH 283
L+LKYPIEH
Sbjct: 66 GILSLKYPIEH 76
Score = 83.0 bits (196), Expect = 7e-17
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IWHHTFYNEL + P+EHPILLTEAPLNPK N
Sbjct: 76 HGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 80.6 bits (190), Expect = 4e-16
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H NWDDME IWH+TFYNEL V P+EHP+LLTEAP NPKAN
Sbjct: 64 HGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKAN 106
Score = 65.3 bits (152), Expect = 2e-11
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQNKFLTL 265
+V D G GM +AGF GD+AP+ VFP +VGRPR G+ +SYV G LTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 266 KYPIEH 283
K P+EH
Sbjct: 59 KDPMEH 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 79.4 bits (187), Expect = 9e-16
Identities = 31/43 (72%), Positives = 37/43 (86%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNPKAN 411
H +NWDDME IW+HTFY+EL V P+EHP+LLTEAPLNPKA+
Sbjct: 30 HGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKAD 72
Score = 29.5 bits (63), Expect = 0.92
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 194 MVGMGQKDSYVKR*GTQQNKFLTLKYPIEH 283
MVGM + D +V ++ LTL YP+EH
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEH 30
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 64.5 bits (150), Expect = 3e-11
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 214 GLLCKEMRHTAK*VPDPQIPHRTHESFT-NWDDMENIWHHTFYNELHVTPKEHPILLTEA 390
G C E+RH I + H NWDDME++W H FYNEL + P + ILLT+
Sbjct: 56 GETCSELRHQL------DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDP 109
Query: 391 PLNPKAN 411
PLNP N
Sbjct: 110 PLNPSKN 116
Score = 48.8 bits (111), Expect = 1e-06
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFTGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVKR*GTQQNKFL 259
+V DNG+G K GF G++ P +VFP +VGRP R++ ++ KD V ++ L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 260 TLKYPIEH 283
+ YP+ +
Sbjct: 67 DINYPVHN 74
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 55.6 bits (128), Expect = 1e-08
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVG 172
+EV+A+VVD GS CKAG+ G+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
Score = 50.8 bits (116), Expect = 3e-07
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +1
Query: 295 TNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLN 399
T+WD ++N+W H F N L + P EHP+LL E PLN
Sbjct: 95 TDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLN 129
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 55.2 bits (127), Expect = 2e-08
Identities = 22/34 (64%), Positives = 30/34 (88%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVG 172
+EV+A+VVD GS CKAG+ G+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 47.6 bits (108), Expect = 3e-06
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 295 TNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLN 399
++WD ++NIW H F + L + P EHP+LL E PLN
Sbjct: 101 SDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 44.4 bits (100), Expect = 3e-05
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 283 HESFTNWDDMENIWHHTFYNELHVTPKEHPILLTEAPLNP 402
H +WD ME W +N L P++H LLTE+PL P
Sbjct: 92 HGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTP 131
Score = 34.3 bits (75), Expect = 0.032
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 83 ALVVDNGSGMCKAGFTGDDAPRAVFPSIV 169
A+V+DNG+G K GF G+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQ 187
+V+DNG+ + G+ G+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 298 NWDDMENIWHHTFYNELHVTPKEHPILLTEAPLN 399
N D IW H F + LH+ P +LLTEAPL+
Sbjct: 72 NSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLS 105
Score = 31.9 bits (69), Expect = 0.17
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFTGDDAPRAVFPSIVGRP 178
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At2g38460.1 68415.m04723 iron transporter-related contains
transmembrane domains; similar to iron-regulated
transporter IREG1 (GI:7264727) [Mus musculus]; similar
to ferroportin1 (GI:7109247) [Mus musculus]
Length = 524
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 228 FT*ESFCPIPTITP*WRGLPTIEGNTARGASSPVKPALHIPEPLSTTNAAT 76
FT SF + T T W G+PT RG S+ V A + PL + +T
Sbjct: 326 FTVLSFGTLMTATLQWEGIPTYIIGIGRGISATVGLAATLVYPLMQSRLST 376
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 183 WRGLPTIEGNTARGASSPVKPA--LHIPEPL 97
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -2
Query: 375 DGVFFGGDM*FIVEGMMPNILHVIPVS 295
DGV GG + + E ++ +I +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = -2
Query: 183 WRGLPTIEGNTARGASSPVKPALHIPEPLSTTNAATSSSHI 61
WR P + + A+GA P++ AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At5g19400.1 68418.m02312 expressed protein
Length = 1093
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 98 NGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMV-GMGQKDSYVKR 232
NG+GM ++ P AVFP + GV+ G+G + S K+
Sbjct: 873 NGNGMGGMPYSQSRTPEAVFPPKIDPVLSSGVVADGLGVQSSLAKK 918
>At5g03570.1 68418.m00315 iron-responsive transporter-related
similar to iron-regulated transporter IREG1 [Mus
musculus] GI:7264727
Length = 512
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 228 FT*ESFCPIPTITP*WRGLPTIEGNTARGASSPVKPALHIPEPL 97
FT SF + T T W+G+PT RG S+ V A + PL
Sbjct: 322 FTVLSFGTLMTATLEWKGIPTYIIGIGRGISAGVGLAATVLYPL 365
>At4g11320.1 68417.m01828 cysteine proteinase, putative contains
similarity to cysteine proteinase RD21A (thiol protease)
GI:435619, SP:P43297 from [Arabidopsis thaliana]
Length = 371
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -1
Query: 253 LILLCASSLYIRVLLSHTDHHALMAGPSHDRGKHCARSIISCEAGLAHTGAI 98
+I CA+++ + V+ S+ +HH + AGP +G A + + E+ + G +
Sbjct: 16 VIASCATAMDMSVVSSNDNHH-VTAGPGRRQGIFDAEATLMFESWMVKHGKV 66
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVKR*GTQQN 250
E++ A + + G G+C A +D + V I GR +GV+ ++ R T +
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVVSEWVYREWIGGRKETVVD 691
Query: 251 KFLTLKYPIEHMNHSLTGMTW 313
K L + +E + L W
Sbjct: 692 KGLEGCFDVEELERVLRISFW 712
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 62 MCDEEVAALVVDNGSGMCKAGFTGDDAPRAVFPSIVGRPRHQ 187
+C + L + +G+ G T DD RAVF S G+ R Q
Sbjct: 222 LCHLGSSILALGHGTSRISMGETQDDVGRAVFISPTGQNRLQ 263
>At4g38310.1 68417.m05414 galactosyl transferase GMA12/MNN10 family
protein other predicted proteins Arabidopsis thaliana
Length = 120
Score = 27.1 bits (57), Expect = 4.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 259 DPQIPHRTHESFTNWDDMENIW 324
DP + + +S TNWD+ + W
Sbjct: 13 DPDLSYSIEKSITNWDEKRHEW 34
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 162 EGNTARGASSPVKPALHIPEPLSTTNAATSSSH 64
E + R AS+ +KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 162 EGNTARGASSPVKPALHIPEPLSTTNAATSSSH 64
E + R AS+ +KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g26744.1 68416.m03344 basix helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 494
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +2
Query: 320 FGIIPSTMNYMSPPKNTPSCLLKLPSTPKP 409
F + PS N N CLL +PS+ P
Sbjct: 99 FSLDPSQQNQFLSTNNNKGCLLNVPSSANP 128
>At3g20980.1 68416.m02653 hypothetical protein
Length = 405
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 265 QIPHRTHESFTNWDDMENIWHHTFYNELHVTP 360
++P E F+ + ENIW + N H+TP
Sbjct: 250 EVPDHVAECFSKYTFHENIWLISSTNSNHMTP 281
>At1g58440.1 68414.m06648 squalene monooxygenase, putative /
squalene epoxidase, putative similar to SP|O65404 (SE
1,1), SP|O65402 (SE 1,2) 6566341 dbj AB008021.1 AB008021
Length = 531
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 229 EMRHTAK*VPDPQIPHRTHESFTNWDDMENI 321
EM++ K V PQ+PH ++SF D NI
Sbjct: 294 EMKNYLKTVVAPQMPHEVYDSFIAAVDKGNI 324
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 353 SPPKNTPSCLLKLPSTPKPT 412
SPP TPS PSTP PT
Sbjct: 147 SPPGETPSPPKPSPSTPTPT 166
>At1g49840.1 68414.m05588 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 494
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 183 WRGLPTIEGNTARGASSPVKPALHIPEPLSTTNAATSS 70
WR P + +TA+G P++ AL +P +T S
Sbjct: 262 WRHTPWLGSHTAKGPVRPLRRALQGLDPRTTATMFAES 299
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,192,590
Number of Sequences: 28952
Number of extensions: 235322
Number of successful extensions: 675
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 615542944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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