Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0662
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0343 + 28132348-28132878,28133256-28133366,28133477-281335... 138 3e-33
02_01_0316 + 2125283-2125687,2125768-2125881,2125986-2126099,212... 132 2e-31
07_03_0406 + 17785046-17785408,17786411-17786479,17786764-177868... 49 3e-06
01_04_0038 - 15339047-15339230,15339683-15339741,15340031-153401... 44 1e-04
01_01_0367 + 2872650-2873045,2873800-2873940,2874255-2874364,287... 43 2e-04
02_05_0003 - 24867053-24867145,24867264-24867437,24867673-248677... 36 0.033
03_04_0233 + 19063780-19064404,19065480-19065601 31 0.95
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 31 0.95
10_08_1028 + 22414928-22415154,22415374-22415558,22416001-22416056 30 1.3
04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966 29 2.2
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 29 2.2
05_06_0067 - 25314741-25315410,25315498-25315892 29 2.9
05_01_0526 - 4534567-4534917 29 2.9
03_05_0168 - 21466431-21466445,21467053-21467160,21467222-214673... 29 2.9
02_03_0326 + 17751485-17751955 29 2.9
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 29 3.8
11_08_0074 + 28162612-28163355 28 5.1
11_06_0629 + 25646268-25646591 28 5.1
08_01_0452 - 3999072-3999344 28 5.1
04_03_0310 + 14208600-14208784,14209117-14209138 28 5.1
03_06_0587 - 34921535-34922041,34922579-34922689 28 5.1
03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169 28 5.1
09_02_0076 - 3959572-3960279 28 6.7
09_01_0041 + 746494-746691,747301-747495,750509-750631,751457-75... 28 6.7
05_01_0551 + 4827676-4829226 28 6.7
04_03_0068 - 10631827-10631947,10632037-10632112,10632152-106330... 28 6.7
11_01_0347 + 2601170-2602019,2602245-2603353 27 8.9
10_08_0285 - 16493678-16493750,16493824-16494380,16494657-164947... 27 8.9
10_01_0294 + 3052598-3052759,3052817-3053311 27 8.9
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 27 8.9
05_06_0125 - 25828093-25828911,25830398-25830530,25830644-25831062 27 8.9
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 27 8.9
03_01_0232 + 1824517-1825506 27 8.9
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388... 27 8.9
01_06_1815 - 40064351-40064887,40064987-40065634,40065834-400658... 27 8.9
01_01_0198 + 1718374-1718875,1719591-1719604 27 8.9
>02_05_0343 +
28132348-28132878,28133256-28133366,28133477-28133590,
28134077-28134367,28134447-28134557,28134658-28134711,
28135587-28135666,28135749-28135864,28136491-28136605,
28136740-28136788,28136984-28137106
Length = 564
Score = 138 bits (334), Expect = 3e-33
Identities = 67/116 (57%), Positives = 83/116 (71%)
Frame = -1
Query: 603 EE*ATVGQQYRVEPFKFLDPPLKAGVSAGRPELKEAGVSVGDEDDLSTPDEKLLGRLVRA 424
+E T+ +QY EP K+L+ LK G LKEAG + DL+T EK LGRLV+
Sbjct: 371 KELETINRQYPFEPLKYLEKTLKLTYEEGIQMLKEAGTEIEPMGDLNTEAEKKLGRLVKE 430
Query: 423 KYDTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRGEEILSGAQRIHDPDLL 256
KY T+F+IL +YPLAVRPFYTMP NP YSNS+D+F+RGEEI+SGAQRIH P+LL
Sbjct: 431 KYGTEFFILYRYPLAVRPFYTMPCYDNPAYSNSFDVFIRGEEIISGAQRIHLPELL 486
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = -3
Query: 235 GVDTSKIAAYIESFRLGCPPHAGGGIGLERVVML 134
G+D S I++YIESF G PPH G G+GLERV++L
Sbjct: 494 GIDASTISSYIESFSYGAPPHGGFGVGLERVLLL 527
>02_01_0316 +
2125283-2125687,2125768-2125881,2125986-2126099,
2126271-2126561,2126658-2126768,2127317-2127370,
2127555-2127634,2127912-2128027,2128141-2128382
Length = 508
Score = 132 bits (320), Expect = 2e-31
Identities = 63/116 (54%), Positives = 81/116 (69%)
Frame = -1
Query: 603 EE*ATVGQQYRVEPFKFLDPPLKAGVSAGRPELKEAGVSVGDEDDLSTPDEKLLGRLVRA 424
+E + +QY +P K+L L+ G LKEAGV V DL+T EK LG LV
Sbjct: 330 KELEAINRQYPFKPLKYLPKTLRIEYDEGIRMLKEAGVHVEAMGDLNTESEKKLGELVHT 389
Query: 423 KYDTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRGEEILSGAQRIHDPDLL 256
KYDTDFY+L +YP AVRPFYTMP +P+YSNS+D+F+RGEEI+SGAQR+H P++L
Sbjct: 390 KYDTDFYMLCRYPSAVRPFYTMPCSDDPRYSNSFDVFVRGEEIISGAQRVHVPEVL 445
Score = 88.6 bits (210), Expect = 3e-18
Identities = 36/56 (64%), Positives = 45/56 (80%)
Frame = -3
Query: 235 GVDTSKIAAYIESFRLGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRVTP 68
G+D IAAY+++FR G PPH G G+GLERVVML+ GL NIRK S+FPRDP+R+ P
Sbjct: 453 GIDVGSIAAYVDAFRYGAPPHGGFGVGLERVVMLFCGLGNIRKASLFPRDPRRLNP 508
>07_03_0406 +
17785046-17785408,17786411-17786479,17786764-17786868,
17787297-17787346,17787363-17787489,17788084-17788221,
17788863-17788940,17789141-17789218,17789318-17789386,
17789720-17789803,17789895-17789981,17790364-17790459,
17790541-17790615,17790762-17790888,17791027-17791142
Length = 553
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = -3
Query: 208 YIESFRLGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDP 83
Y++ R G PHAG G+G ER+V G+DNIR T FPR P
Sbjct: 507 YLDLRRYGSVPHAGFGLGFERLVQFATGMDNIRDTIPFPRVP 548
>01_04_0038 -
15339047-15339230,15339683-15339741,15340031-15340160,
15340248-15340498,15340632-15341225,15342050-15342511
Length = 559
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -3
Query: 208 YIESFRLGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKR 77
Y++ R G H+G G+G ER+++ GL+NIR FPR P R
Sbjct: 513 YLDLRRFGSVKHSGFGLGFERMILFATGLENIRDVIPFPRYPGR 556
>01_01_0367 +
2872650-2873045,2873800-2873940,2874255-2874364,
2875279-2875390,2875959-2876030,2876605-2876696,
2877116-2877236,2877712-2877834,2877935-2878130,
2878221-2878408,2878553-2878624,2879336-2879434,
2880027-2880107,2880337-2880405,2880730-2880787,
2881181-2881347
Length = 698
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = -3
Query: 220 KIAAYIESFRLGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFPR 89
K +E F +G PPH G GL+R+VML G ++IR FP+
Sbjct: 628 KFGYLLECFDMGAPPHGGIAYGLDRLVMLLAGENSIRDVIAFPK 671
>02_05_0003 -
24867053-24867145,24867264-24867437,24867673-24867735,
24868108-24868198,24869579-24869673,24870471-24870668,
24871475-24871648,24872335-24872439,24872645-24872737,
24873688-24873690,24874776-24874844,24875208-24875265,
24875810-24875918,24876603-24876714,24877992-24878204,
24878214-24878546
Length = 660
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = -3
Query: 208 YIESFRLGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFP 92
++ S G PP +G G+G++R+VML +IR FP
Sbjct: 616 FLTSLEYGMPPASGMGLGIDRLVMLLTNSASIRDVIAFP 654
>03_04_0233 + 19063780-19064404,19065480-19065601
Length = 248
Score = 30.7 bits (66), Expect = 0.95
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 181 PPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRVTP 68
PP G + ML LGL ++ + ++ P DPK+ TP
Sbjct: 5 PPPPPSSPGYVKEKMLKLGLTDVNEGNVVPIDPKKFTP 42
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 30.7 bits (66), Expect = 0.95
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 417 DTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRGEEILSGAQRIH 271
D Y L + P R F+ P P N YS + M EE+ R+H
Sbjct: 479 DESIYALHRSPYPPRGFHLPPTPPNKHYSLRFTMRAIVEELAGFGVRVH 527
>10_08_1028 + 22414928-22415154,22415374-22415558,22416001-22416056
Length = 155
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 540 LKAGVSAGRPELKEAGVSVGDEDDLSTPDEKLLGRLVRAKYDTDFYIL 397
L G + G+P L E G + G+E++ +E+ G+ RA D +I+
Sbjct: 4 LSVGSAGGKPRLLEGGAAAGEEEE----EEEKAGKAGRAAPDRSIHII 47
>04_03_0604 - 17916482-17917659,17918121-17918291,17919015-17919966
Length = 766
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 395 TNILSPSDPSTPCRIPGTL-NIPIRTTCSCAARR 297
T+I +DP PC +PGT N+P C C R
Sbjct: 317 TDIDECADPKYPCSVPGTCHNLPGGFECLCPRSR 350
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 45 IHLYYEIYGVTRFGSLGNIEVFLMLSRPRYSITTRSRPIPP-PACGGQP 188
I L+++ + G +E F +L++P YS +R PP PA P
Sbjct: 168 IRLFHDSLDYPYVNNSGTVEEFFLLTKPEYSGPAPAREPPPVPAIAPSP 216
>05_06_0067 - 25314741-25315410,25315498-25315892
Length = 354
Score = 29.1 bits (62), Expect = 2.9
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -1
Query: 573 RVEPFKFLDPPLKAGVSAGRPELKEAGVSVGDEDDLSTPDEKLLGRLVRAKYDTDFYILD 394
RV F PPL+ ++ R +L AGV G+E++ S +E G +A Y L
Sbjct: 280 RVSMIYFGGPPLEQRIAPLR-QLLVAGVGNGEEEEQSRYEEFTWGEYKKAAY---LSRLS 335
Query: 393 KYPLAVRPFYTMPDP-GNP 340
LA PF+ P P NP
Sbjct: 336 DNRLA--PFHRQPPPVANP 352
>05_01_0526 - 4534567-4534917
Length = 116
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 164 ATCVRGAAQPERLDVGRYLARVDAVEARALARRSGSWIRWAPL 292
A+ V +A+P R A ARA A SG W WAPL
Sbjct: 6 ASTVSFSARPSAASAVRPCAAAGRARARAAAGESGKW--WAPL 46
>03_05_0168 -
21466431-21466445,21467053-21467160,21467222-21467365,
21467778-21467846,21467928-21468071,21468409-21468565,
21468671-21468767,21469015-21469297,21469382-21469507,
21470098-21470178,21471990-21472072,21472393-21472478,
21473329-21473422,21473516-21473681,21473777-21473851,
21474082-21474157,21474259-21474347
Length = 630
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 208 YIESFRLGCPPHAGGGIGLERVVMLYLGLDNIR 110
+ + G PP G G+G++R+ ML NI+
Sbjct: 558 FCTALEYGLPPTGGWGLGIDRLTMLLTDSQNIK 590
>02_03_0326 + 17751485-17751955
Length = 156
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -3
Query: 181 PPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRVTP 68
PP + G + ML LGL ++ + ++ P DP++ TP
Sbjct: 5 PPPSPASPGSVKEKMLKLGLADVNEGNVVPIDPEKFTP 42
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 393 CPGYRSPCRTWPAPACP 443
CP + SPC +P PA P
Sbjct: 148 CPAWSSPCHCYPPPAMP 164
>11_08_0074 + 28162612-28163355
Length = 247
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 561 FKFLDPPLKAGVSAGRPELKEAGVSVGDEDDLSTPDEKL--LGRLV 430
F F PP A A P EA V+V +DD T + +L LG LV
Sbjct: 58 FCFKKPPALASTYAQEPHAGEAVVAVAVDDDDDTVEAQLMRLGSLV 103
>11_06_0629 + 25646268-25646591
Length = 107
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 481 RRGRPVHSGREAPGQAGAGQVRHGLLYPGQIS 386
R RP+ GR+A G G G RH LL+P ++
Sbjct: 50 RHRRPICGGRKARG--GGGSHRHRLLHPPDLA 79
>08_01_0452 - 3999072-3999344
Length = 90
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 360 WCRRVGRREDICPGYRSPCRTWP--APACPGASRPEW 464
WC R D+ PG +P WP A GA W
Sbjct: 48 WCPPTSGRSDLVPGSSAPRSRWPWKAEEAIGAELGRW 84
>04_03_0310 + 14208600-14208784,14209117-14209138
Length = 68
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -3
Query: 535 SWSFRRPSRVEGSWSVCWRRGRPVHSG-REAPGQAG 431
+W RP R +WS RGR SG APG G
Sbjct: 9 NWGRVRPLRARDAWSGARTRGRGADSGVTGAPGTGG 44
>03_06_0587 - 34921535-34922041,34922579-34922689
Length = 205
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -3
Query: 520 RPSRVEGSWSVCWRRGRPVHSGREAPGQAGAGQ 422
R R G C++ G+P H RE P G G+
Sbjct: 117 RAPRGSGGGGDCYKCGKPGHFARECPSGDGGGR 149
>03_06_0245 - 32619410-32619510,32619698-32620668,32620694-32621169
Length = 515
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 513 PELKEAGVSVGDEDDLSTPDEKLLGRLVRAKY 418
PE E V GDE+D+ T ++ LG+ + ++
Sbjct: 183 PEFAEEDVLTGDEEDVLTGEDVFLGKAKKVEF 214
>09_02_0076 - 3959572-3960279
Length = 235
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 181 PPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRVTP 68
PP + G + + ML LGL ++ + ++ P DP++ TP
Sbjct: 8 PPSSPGSV---KEKMLKLGLTDVNEGNVVPVDPEKFTP 42
>09_01_0041 +
746494-746691,747301-747495,750509-750631,751457-751636,
752772-753058,754343-754907
Length = 515
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 248 ALARRSG--SWIRWAPLSISSPRMNMSYELEYLGFPGSGMV*KGRTARGYLSR 400
A ARR G +W RW + S +S L G PG+G +G AR + R
Sbjct: 436 ATARRRGTAAWWRWHRDAGSGTPRQISPTLSGSGLPGAGGQPRGPAARAWRMR 488
>05_01_0551 + 4827676-4829226
Length = 516
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -3
Query: 577 VPGGTLQILGSSPESWSFRRPSRVEGSWSVCWRRGRPVHSGREAPGQAGAGQVR 416
+PGGT G+ + RVEG W R RP G GAG+VR
Sbjct: 392 LPGGTAVRKGTRVVFCLYAM-GRVEGIWGSDCREFRPERWLSTGDGDGGAGKVR 444
>04_03_0068 -
10631827-10631947,10632037-10632112,10632152-10633021,
10650975-10651599
Length = 563
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 181 PPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRVTP 68
PP + G + + ML LGL ++ + ++ P DP++ TP
Sbjct: 8 PPSSPGSV---KEKMLKLGLTDVNEGNVVPVDPEKFTP 42
>11_01_0347 + 2601170-2602019,2602245-2603353
Length = 652
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 535 SWSFRRPSRVEGSWSVCWRRGRPVHSGREAPGQAG 431
+W R +R G WR P H GR+ P + G
Sbjct: 185 AWRGRLQTRPPGFRGEGWRPPAPFHQGRQDPEEGG 219
>10_08_0285 -
16493678-16493750,16493824-16494380,16494657-16494798,
16495349-16495459,16495593-16496812
Length = 700
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 57 YEIYGVTRFGSLGNIEVFLMLSRPRYSITTRSRPIPPP 170
Y YG+ + +L N+++ +M R ++ P+ PP
Sbjct: 639 YPCYGLPKIKNLHNVKITMMQVTTRETVRGTREPVKPP 676
>10_01_0294 + 3052598-3052759,3052817-3053311
Length = 218
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 181 PPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRVTP 68
PP + G ++ ML LGL ++ + ++ P DP++ TP
Sbjct: 7 PPPSSPGFVKDK--MLKLGLTDVNEGNVVPIDPEKFTP 42
>07_03_1669 +
28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 212 RYLARVDAVEARALARRSGSWIRWAPLSISSPRMNMSYELEYLGFPGS 355
R+ + + +ALA+R G W + PL ++ + +E G PGS
Sbjct: 413 RWTIHPEEEKLKALAKREGLWNLFIPLDSAARARELLFEDMSHGSPGS 460
>05_06_0125 - 25828093-25828911,25830398-25830530,25830644-25831062
Length = 456
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 167 TCVRGAAQPERLDVGRYLARVDAVEARALARRSGSW 274
TC+ +P VG +LAR+ + A RRSG W
Sbjct: 347 TCIPMPDEP----VGGFLARIPVIRRWATPRRSGRW 378
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 27.5 bits (58), Expect = 8.9
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Frame = +1
Query: 292 KYLLAAHEHVVRIGIFRVPGIRHGVEGSDGERIFVQDI------EVRVVLGPHQPAQELL 453
KY+L H+ V F P + V G+D ++ + + EV + G ++
Sbjct: 197 KYVLEGHDRGVNWASFH-PTLPLIVSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVM 255
Query: 454 VRSGQVVLVSNRHSSFLQLWTACGNSSFQGRIQEFEGFHPVLLTHSRL 597
+ Q ++VSN +++W A + Q +E + F +L H +
Sbjct: 256 FHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFW-ILSAHPEM 302
>03_01_0232 + 1824517-1825506
Length = 329
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 451 EAPGQAGAGQVRHGLLYPGQISSRRPTLLHHAGSREP 341
EAP QAG + G+ + ++ + LLHH +++P
Sbjct: 63 EAPAQAGTQWIGEGVGHLARLLAGLTELLHHPQAQDP 99
>02_04_0624 +
24538095-24538183,24538429-24538612,24538725-24538886,
24538988-24539225,24539301-24539370,24539439-24539530,
24539799-24539836,24540018-24540039,24540462-24540618,
24540702-24540753,24542144-24542207,24542279-24542362,
24543418-24543543,24543622-24543818,24543903-24544091,
24544186-24544434,24544507-24544556,24544977-24545059,
24545164-24545449,24545751-24545794,24545878-24546626
Length = 1074
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 220 KIAAYIESFRLGCPPHAGGGIGLERVVMLYLGLDNIRKTSMFPRDPKRVT 71
KI Y + CPP+A + ++ + Y+GLD I K + R+ VT
Sbjct: 686 KINPYSVKLYVPCPPNARATLKVDVIFEEYVGLD-IHKKHVVSREDFHVT 734
>01_06_1815 -
40064351-40064887,40064987-40065634,40065834-40065890,
40065921-40065941,40066714-40066941
Length = 496
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/51 (33%), Positives = 20/51 (39%)
Frame = -3
Query: 550 GSSPESWSFRRPSRVEGSWSVCWRRGRPVHSGREAPGQAGAGQVRHGLLYP 398
GS S + R R + RRGR APG G G V+ L P
Sbjct: 15 GSPASSRNARHRQRKGVRLRMLRRRGRQPVEAERAPGDGGGGAVQEDLALP 65
>01_01_0198 + 1718374-1718875,1719591-1719604
Length = 171
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +3
Query: 351 DPAWCRRVGRREDICPGYRSPCRTWPAPACPGASRPEWTGRPRLQQTLQL 500
D W R G + P +R W PA W RPR ++ L +
Sbjct: 70 DGGWLRARGTADGGRPDWRERRTRWRRPAWRERRGRRWRRRPRCEEELPI 119
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,509,185
Number of Sequences: 37544
Number of extensions: 464655
Number of successful extensions: 1944
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1942
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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