Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0662
(612 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 27 0.14
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 25 0.44
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 25 0.44
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 25 0.44
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.4
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 4.1
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 4.1
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 7.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.2
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 21 7.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 7.2
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 7.2
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 7.2
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 9.5
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 9.5
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 21 9.5
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.5
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 27.1 bits (57), Expect = 0.14
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -3
Query: 580 TVPGGTLQILGSSPESWSFRRPSRVEGSWS---VCW 482
T GG + + ++PE+ +FR+ + WS VCW
Sbjct: 794 TTRGGKIPVRWTAPEAIAFRKFTSASDVWSMGIVCW 829
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 424 QVRHGLLYPGQISSRRPTLLHHAGS 350
++ HG L + S+RP LLH GS
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGS 673
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 424 QVRHGLLYPGQISSRRPTLLHHAGS 350
++ HG L + S+RP LLH GS
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGS 673
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.44
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 424 QVRHGLLYPGQISSRRPTLLHHAGS 350
++ HG L + S+RP LLH GS
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGS 673
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 135 CILVWTTSERPQCSRETRNASRRKFHNTNVYCK 37
C+L SE S+E RR FH ++ + K
Sbjct: 628 CLLPRPKSENNFASQELSREGRRIFHKSDTFHK 660
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -1
Query: 135 CILVWTTSERPQCSRETRNASRRKFHNTNVYCK 37
C+L SE S+E RR FH ++ + K
Sbjct: 596 CLLPRPKSENNFASQELSREGRRIFHKSDTFHK 628
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 33 YPYNIHLYYEIYGVTRFGSLGN 98
YP + +LYY+ Y + R G L N
Sbjct: 23 YPKDPYLYYDFYPLER-GELTN 43
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 33 YPYNIHLYYEIYGVTRFGSLGN 98
YP + +LYY+ Y + R G L N
Sbjct: 38 YPKDPYLYYDFYPLER-GELTN 58
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = -2
Query: 440 AGWCGPSTTRTSISWTNILSPSDP 369
+ + GP ISW ++ P P
Sbjct: 419 SSFVGPKVKDCLISWNPLMQPKQP 442
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -1
Query: 546 PPLKAGVSAGRPELKEAG 493
PP K +AG+P + G
Sbjct: 529 PPAKGAAAAGQPSKRNGG 546
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 286 AAKYLLAAHEHVVRI 330
A KY + H+H+VR+
Sbjct: 102 AIKYWVERHKHIVRL 116
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 454 VRSGQVVLVSNRHSSFLQLWT 516
+++G V++ SSF+ WT
Sbjct: 379 IQNGDYVVLETEWSSFINPWT 399
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 170 CVRGAAQPERLDVGRYLARVD 232
C RGA Q +GR LA D
Sbjct: 41 CYRGAPQDSENLLGRVLAEFD 61
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 454 VRSGQVVLVSNRHSSFLQLWT 516
+++G V++ SSF+ WT
Sbjct: 85 IQNGDYVVLETEWSSFINPWT 105
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -3
Query: 442 GQAGAGQVRHGLLYPGQISSRRPTLL 365
G G+V G+L PG + + P L
Sbjct: 260 GTVPVGRVETGILKPGMLVTFAPAAL 285
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.0 bits (42), Expect = 9.5
Identities = 18/87 (20%), Positives = 31/87 (35%)
Frame = -1
Query: 534 AGVSAGRPELKEAGVSVGDEDDLSTPDEKLLGRLVRAKYDTDFYILDKYPLAVRPFYTMP 355
AG+ + EL A S E P + + Y +++ D + A F
Sbjct: 398 AGLLSAYGELLHALTSGKCEHRPFEPKSTAVQKYQDQDYQPIYFVADSFEDAKEKFRRWV 457
Query: 354 DPGNPKYSNSYDMFMRGEEILSGAQRI 274
+ + YD + + EIL R+
Sbjct: 458 STMSRPFEVRYDPYTQRVEILDSVDRL 484
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +1
Query: 445 ELLVRSGQVVLVSNRH 492
+ L+RSGQ+ ++S+ H
Sbjct: 63 QYLIRSGQLNIISSDH 78
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +3
Query: 90 LGNIEVFLMLSRPRYSITTRSRPIPPPA 173
LGN V +M++ + +T + PPA
Sbjct: 502 LGNDTVIVMMNFSKNPVTVNLTKLHPPA 529
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,948
Number of Sequences: 438
Number of extensions: 4303
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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