Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0661
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-P...    29   3.7  
U24245-1|AAA65114.1|   98|Drosophila melanogaster L71-6 protein.       29   6.4  
U23836-5|AAA74180.1|  126|Drosophila melanogaster L71-6 protein.       29   6.4  
AE014296-2559|AAF49594.1|   98|Drosophila melanogaster CG7336-PA...    29   6.4  
M25294-1|AAA17842.1|  151|Drosophila melanogaster dsx protein.         28   8.4  
AE014297-674|AAF54169.1|  549|Drosophila melanogaster CG11094-PA...    28   8.4  
AE014296-645|AAF47762.1|  914|Drosophila melanogaster CG14961-PA...    28   8.4  

>AE014298-1525|AAF47976.2| 1059|Drosophila melanogaster CG11203-PA
            protein.
          Length = 1059

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +1

Query: 379  SC*KIFPKATTSTTKTGRLRKRSHSLRPSHFSE-PCPRHSLRPPKKDYH 522
            +C  +   AT + T T  + +  HS   SHF+  P  R    PP ++YH
Sbjct: 959  NCQSVTATATATATATA-IEQSKHSSYSSHFARSPTRRPESPPPLRNYH 1006


>U24245-1|AAA65114.1|   98|Drosophila melanogaster L71-6 protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 185 RSWRDLTRCRPINSSCLM 238
           R+WR LTRC  + +SC++
Sbjct: 62  RNWRKLTRCELVKASCIV 79


>U23836-5|AAA74180.1|  126|Drosophila melanogaster L71-6 protein.
          Length = 126

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 185 RSWRDLTRCRPINSSCLM 238
           R+WR LTRC  + +SC++
Sbjct: 62  RNWRKLTRCELVKASCIV 79


>AE014296-2559|AAF49594.1|   98|Drosophila melanogaster CG7336-PA
           protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 185 RSWRDLTRCRPINSSCLM 238
           R+WR LTRC  + +SC++
Sbjct: 62  RNWRKLTRCELVKASCIV 79


>M25294-1|AAA17842.1|  151|Drosophila melanogaster dsx protein.
          Length = 151

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +1

Query: 403 ATTSTTKTGRLRKRSHSLRPSHFSEPCPRHS 495
           ATTS+T T   R+RS S  P+    P P HS
Sbjct: 102 ATTSSTPTLSRRQRSRSATPTTPPPPPPAHS 132


>AE014297-674|AAF54169.1|  549|Drosophila melanogaster CG11094-PA,
           isoform A protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +1

Query: 403 ATTSTTKTGRLRKRSHSLRPSHFSEPCPRHS 495
           ATTS+T T   R+RS S  P+    P P HS
Sbjct: 500 ATTSSTPTLSRRQRSRSATPTTPPPPPPAHS 530


>AE014296-645|AAF47762.1|  914|Drosophila melanogaster CG14961-PA
           protein.
          Length = 914

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +1

Query: 418 TKTGRL-RKRSHSLRPSHFSEPCPRHS 495
           +K GRL R+R+HS RPS   +P   HS
Sbjct: 113 SKNGRLPRRRNHSRRPSIHQQPPSPHS 139


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,627,946
Number of Sequences: 53049
Number of extensions: 456730
Number of successful extensions: 1284
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)