Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0657
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY496232-1|AAS77218.1| 211|Homo sapiens truncated alpha-1,4-gal... 31 3.0
X80818-1|CAA56784.1| 912|Homo sapiens metabotropic glutamate re... 31 4.0
U92457-1|AAB51762.1| 912|Homo sapiens metabotropic glutamate re... 31 4.0
BC130528-1|AAI30529.1| 912|Homo sapiens glutamate receptor, met... 31 4.0
BC130526-1|AAI30527.1| 912|Homo sapiens glutamate receptor, met... 31 4.0
AL590403-1|CAI17348.1| 912|Homo sapiens glutamate receptor, met... 31 4.0
AK131536-1|BAD18673.1| 796|Homo sapiens protein ( Homo sapiens ... 31 4.0
BC000128-1|AAH00128.1| 327|Homo sapiens immediate early respons... 29 9.2
AJ251089-1|CAB91983.1| 327|Homo sapiens hypothetical protein pr... 29 9.2
AF178984-1|AAF44348.1| 327|Homo sapiens hypothetical protein SB... 29 9.2
>AY496232-1|AAS77218.1| 211|Homo sapiens truncated
alpha-1,4-galactosyltransferase protein.
Length = 211
Score = 31.1 bits (67), Expect = 3.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 426 TCSTCWGVWV*GWRRGTRPSPLG 358
TC TCW W G GT P P G
Sbjct: 144 TCWTCWNSWTCGSCSGTHPWPTG 166
>X80818-1|CAA56784.1| 912|Homo sapiens metabotropic glutamate
receptor type 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 441 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 340
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>U92457-1|AAB51762.1| 912|Homo sapiens metabotropic glutamate
receptor 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 441 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 340
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>BC130528-1|AAI30529.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 441 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 340
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>BC130526-1|AAI30527.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 441 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 340
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>AL590403-1|CAI17348.1| 912|Homo sapiens glutamate receptor,
metabotropic 4 protein.
Length = 912
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 441 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 340
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 551 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 585
>AK131536-1|BAD18673.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ16766 fis, clone BRAWH3013197, highly similar
to Metabotropic glutamate receptor 4 precursor. ).
Length = 796
Score = 30.7 bits (66), Expect = 4.0
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -1
Query: 441 RVERGTCSTC-WGVWV*GWRRGTRPSPLGRLQWGS 340
+V+R TC TC + + R G RP P+ +L+WGS
Sbjct: 435 QVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGS 469
>BC000128-1|AAH00128.1| 327|Homo sapiens immediate early response 5
protein.
Length = 327
Score = 29.5 bits (63), Expect = 9.2
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -3
Query: 226 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 56
+G P + R R+PC C EDP +P R CA R D P C ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221
>AJ251089-1|CAB91983.1| 327|Homo sapiens hypothetical protein
protein.
Length = 327
Score = 29.5 bits (63), Expect = 9.2
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -3
Query: 226 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 56
+G P + R R+PC C EDP +P R CA R D P C ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221
>AF178984-1|AAF44348.1| 327|Homo sapiens hypothetical protein
SBBI48 protein.
Length = 327
Score = 29.5 bits (63), Expect = 9.2
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = -3
Query: 226 FGFCPVLKRDLRQPCSCL---EDPIASPLVHVRLGASCAWRF**DSPSFCNIYCRTRKYA 56
+G P + R R+PC C EDP +P R CA R D P C ++ A
Sbjct: 162 WGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPRPAEDEPPAPPAVCPRKRCA 221
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,304,800
Number of Sequences: 237096
Number of extensions: 2080055
Number of successful extensions: 4840
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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