Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0656
         (388 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F1F7D8 Cluster: PREDICTED: similar to pol polypr...    32   4.4  
UniRef50_Q4U986 Cluster: HesB-family member protein, putative; n...    32   4.4  
UniRef50_Q9VNK8 Cluster: CG15580-PA, isoform A; n=4; Sophophora|...    31   5.8  
UniRef50_Q8D1U8 Cluster: Low affinity potassium transport system...    31   5.8  
UniRef50_Q0G4G4 Cluster: Flagellar biosynthesis protein; n=2; Au...    31   7.7  
UniRef50_A0LYB0 Cluster: Secreted protein containing PHP domain-...    31   7.7  
UniRef50_Q17AM8 Cluster: Putative uncharacterized protein; n=1; ...    31   7.7  
UniRef50_Q0D2K5 Cluster: Putative uncharacterized protein; n=2; ...    31   7.7  

>UniRef50_UPI0000F1F7D8 Cluster: PREDICTED: similar to pol
           polyprotein; n=3; Danio rerio|Rep: PREDICTED: similar to
           pol polyprotein - Danio rerio
          Length = 1293

 Score = 31.9 bits (69), Expect = 4.4
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = +2

Query: 221 ANLKLLSRIDMEFAG*TYQCTKDRKSEEHGTADVSAKSGECTCG 352
           AN   LSR     AG  Y   K+ +  E G  D    S +C CG
Sbjct: 720 ANADALSRRPCAIAGCRYCDKKEARDRELGNVDAGENSADCKCG 763


>UniRef50_Q4U986 Cluster: HesB-family member protein, putative; n=3;
           Theileria|Rep: HesB-family member protein, putative -
           Theileria annulata
          Length = 335

 Score = 31.9 bits (69), Expect = 4.4
 Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
 Frame = -2

Query: 234 SFKFAYFLNFCRFSSCRMFIYKKFVCKISH-GTLN-LSIVHFPLCYDFGKYLLKSNSVS 64
           SF F YF++ C F+  +  +Y  F+  +S   T N L+ + F    ++ K+ + SN+++
Sbjct: 121 SFNFNYFISKCEFTHLKQQLYNNFIITLSRILTYNILNNLSFRFSINYLKFNIHSNNLN 179


>UniRef50_Q9VNK8 Cluster: CG15580-PA, isoform A; n=4;
           Sophophora|Rep: CG15580-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 743

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +2

Query: 131 KFKVP*LILHTNFLYINILHEENLQKLRKYANLKLLSRIDMEFA 262
           +F+V  ++   N+++ N+ H ENL K+ K     ++ RI+ +FA
Sbjct: 595 EFEVDMIVRRNNYIHENLHHGENLCKVVKERRHPIVQRIEEDFA 638


>UniRef50_Q8D1U8 Cluster: Low affinity potassium transport system
           protein kup; n=1; Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis|Rep: Low affinity
           potassium transport system protein kup - Wigglesworthia
           glossinidia brevipalpis
          Length = 625

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = -1

Query: 121 TLSSLL*FREIFIKE*FSIYKVTF--TILLRNFTIFIKNS 8
           T  SLL F++ F K  F I K+TF  TIL+  F IFI NS
Sbjct: 382 TFFSLLFFKKKFEK--FKILKITFLLTILILEFFIFISNS 419


>UniRef50_Q0G4G4 Cluster: Flagellar biosynthesis protein; n=2;
           Aurantimonadaceae|Rep: Flagellar biosynthesis protein -
           Fulvimarina pelagi HTCC2506
          Length = 250

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 252 MSIRESSFKFAYFLNFCRFSSCRMFI 175
           MS   S+F FA+FL FCR  +C M +
Sbjct: 1   MSEAASAFVFAHFLVFCRIGTCLMLL 26


>UniRef50_A0LYB0 Cluster: Secreted protein containing PHP
           domain-likely a phosphoesterase; n=3; Bacteroidetes|Rep:
           Secreted protein containing PHP domain-likely a
           phosphoesterase - Gramella forsetii (strain KT0803)
          Length = 397

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 12/48 (25%), Positives = 27/48 (56%)
 Frame = +1

Query: 97  EIITKRKVYNRQI*SAVTNFTYELLVYKHSTRGKPTKIKKIREFKTTF 240
           +II + K+Y +     +  +  + + Y+ +T+G   ++K ++EFK  F
Sbjct: 75  KIIPQEKIYQKAFKKYLKKYGKDWINYRETTKGIQVQLKTLKEFKPLF 122


>UniRef50_Q17AM8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 200

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 20/61 (32%), Positives = 33/61 (54%)
 Frame = +3

Query: 9   LFFMKIVKFLSKIVNVTL*ILNYSLINISRNHNKEESVQSTNLKCRD*FYIRTSCI*TFY 188
           LF +K+VK    ++N+ + ILN  L + + +         +NL CR   YI +S + TFY
Sbjct: 13  LFALKLVKGCD-LMNLRIAILNDELDSPNESCVFSSGCSLSNLSCRYISYINSSVVKTFY 71

Query: 189 T 191
           +
Sbjct: 72  S 72


>UniRef50_Q0D2K5 Cluster: Putative uncharacterized protein; n=2;
           Homo sapiens|Rep: Putative uncharacterized protein -
           Homo sapiens (Human)
          Length = 195

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 278 CTKDRKSEEHGTADVSAKSGECTCGCG 358
           CT + +  E  T + SAK+G CTC  G
Sbjct: 65  CTSECQCVEENTLECSAKNGSCTCKSG 91


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,991,765
Number of Sequences: 1657284
Number of extensions: 6798350
Number of successful extensions: 17622
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17618
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)