Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0656
         (388 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC105690-1|AAI05691.1|  195|Homo sapiens Unknown (protein for MG...    31   1.3  
DQ021502-1|AAY26397.1|  266|Homo sapiens odd-skipped related 1 (...    29   5.2  
BC025712-1|AAH25712.1|  266|Homo sapiens odd-skipped related 1 (...    29   5.2  
AK074591-1|BAC11079.1|  266|Homo sapiens protein ( Homo sapiens ...    29   5.2  
AC018741-1|AAY14760.1|  266|Homo sapiens unknown protein.              29   5.2  
AB082568-1|BAB92079.1|  266|Homo sapiens zinc finger transcripti...    29   5.2  
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    28   9.1  

>BC105690-1|AAI05691.1|  195|Homo sapiens Unknown (protein for
           MGC:125505) protein.
          Length = 195

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 278 CTKDRKSEEHGTADVSAKSGECTCGCG 358
           CT + +  E  T + SAK+G CTC  G
Sbjct: 65  CTSECQCVEENTLECSAKNGSCTCKSG 91


>DQ021502-1|AAY26397.1|  266|Homo sapiens odd-skipped related 1
           (Drosophila) protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 178 KHSTRGK-PTKIKKIREFKTTFTNRHGVRWLNLSVYER 288
           K  TRG+ P+K KK  EF   F  RH  +  NL ++ER
Sbjct: 160 KKPTRGRLPSKTKK--EFVCKFCGRHFTKSYNLLIHER 195


>BC025712-1|AAH25712.1|  266|Homo sapiens odd-skipped related 1
           (Drosophila) protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 178 KHSTRGK-PTKIKKIREFKTTFTNRHGVRWLNLSVYER 288
           K  TRG+ P+K KK  EF   F  RH  +  NL ++ER
Sbjct: 160 KKPTRGRLPSKTKK--EFVCKFCGRHFTKSYNLLIHER 195


>AK074591-1|BAC11079.1|  266|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90110 fis, clone HEMBA1006572, moderately
           similar to ODD-SKIPPED PROTEIN. ).
          Length = 266

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 178 KHSTRGK-PTKIKKIREFKTTFTNRHGVRWLNLSVYER 288
           K  TRG+ P+K KK  EF   F  RH  +  NL ++ER
Sbjct: 160 KKPTRGRLPSKTKK--EFVCKFCGRHFTKSYNLLIHER 195


>AC018741-1|AAY14760.1|  266|Homo sapiens unknown protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 178 KHSTRGK-PTKIKKIREFKTTFTNRHGVRWLNLSVYER 288
           K  TRG+ P+K KK  EF   F  RH  +  NL ++ER
Sbjct: 160 KKPTRGRLPSKTKK--EFVCKFCGRHFTKSYNLLIHER 195


>AB082568-1|BAB92079.1|  266|Homo sapiens zinc finger transcription
           factor protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 178 KHSTRGK-PTKIKKIREFKTTFTNRHGVRWLNLSVYER 288
           K  TRG+ P+K KK  EF   F  RH  +  NL ++ER
Sbjct: 160 KKPTRGRLPSKTKK--EFVCKFCGRHFTKSYNLLIHER 195


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -3

Query: 161 YVKLVTAL*ICRLYTFLFVMISGNIY*RVIQYL*GDIH-DFTEKFHNFH 18
           Y+ +   + IC LY F++V I  NIY R +Q + G+I    T K + F+
Sbjct: 80  YLHIFIYICIC-LYIFIYVFIYINIYMRGLQNIHGNIELKATNKKYKFY 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,452,275
Number of Sequences: 237096
Number of extensions: 957967
Number of successful extensions: 2167
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2167
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)