Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0656
         (388 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089385-1|AAL90123.1|  650|Drosophila melanogaster AT21001p pro...    31   0.40 
AE014297-399|AAN13231.1|  566|Drosophila melanogaster CG15580-PB...    31   0.40 
AE014297-398|AAF51922.1|  743|Drosophila melanogaster CG15580-PA...    31   0.40 
BT022829-1|AAY55245.1|  790|Drosophila melanogaster IP13307p pro...    29   1.6  
BT012481-1|AAS93752.1|  314|Drosophila melanogaster RE03479p pro...    28   3.7  
AY118317-1|AAM48346.1|  252|Drosophila melanogaster GM21019p pro...    28   3.7  
AF513720-1|AAM49613.1|  314|Drosophila melanogaster palmitoyl-pr...    28   3.7  
AE014298-1220|AAF46403.2|  314|Drosophila melanogaster CG12108-P...    28   3.7  
AE014134-630|AAF51090.1|  807|Drosophila melanogaster CG15415-PA...    28   4.9  

>AY089385-1|AAL90123.1|  650|Drosophila melanogaster AT21001p
           protein.
          Length = 650

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +2

Query: 131 KFKVP*LILHTNFLYINILHEENLQKLRKYANLKLLSRIDMEFA 262
           +F+V  ++   N+++ N+ H ENL K+ K     ++ RI+ +FA
Sbjct: 502 EFEVDMIVRRNNYIHENLHHGENLCKVVKERRHPIVQRIEEDFA 545


>AE014297-399|AAN13231.1|  566|Drosophila melanogaster CG15580-PB,
           isoform B protein.
          Length = 566

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +2

Query: 131 KFKVP*LILHTNFLYINILHEENLQKLRKYANLKLLSRIDMEFA 262
           +F+V  ++   N+++ N+ H ENL K+ K     ++ RI+ +FA
Sbjct: 418 EFEVDMIVRRNNYIHENLHHGENLCKVVKERRHPIVQRIEEDFA 461


>AE014297-398|AAF51922.1|  743|Drosophila melanogaster CG15580-PA,
           isoform A protein.
          Length = 743

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = +2

Query: 131 KFKVP*LILHTNFLYINILHEENLQKLRKYANLKLLSRIDMEFA 262
           +F+V  ++   N+++ N+ H ENL K+ K     ++ RI+ +FA
Sbjct: 595 EFEVDMIVRRNNYIHENLHHGENLCKVVKERRHPIVQRIEEDFA 638


>BT022829-1|AAY55245.1|  790|Drosophila melanogaster IP13307p
           protein.
          Length = 790

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = +2

Query: 155 LHTNFLY-INILHEEN---LQKLRKYANLKLLSRIDMEFAG*TYQCTKDRKS 298
           LH +FL  +N L  EN   LQKL +Y +L++ + + +     T +C +DR S
Sbjct: 143 LHDDFLARLNALELENCELLQKLAEYEDLRIANTLAVAEKEKTIECLQDRVS 194


>BT012481-1|AAS93752.1|  314|Drosophila melanogaster RE03479p
           protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 164 NFLYINILHEENLQKLRKYANLKLLS 241
           N L+IN  + ENLQKL+K+  ++ L+
Sbjct: 215 NELFINKFYIENLQKLKKFVMVQFLN 240


>AY118317-1|AAM48346.1|  252|Drosophila melanogaster GM21019p
           protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 164 NFLYINILHEENLQKLRKYANLKLLS 241
           N L+IN  + ENLQKL+K+  ++ L+
Sbjct: 153 NELFINKFYIENLQKLKKFVMVQFLN 178


>AF513720-1|AAM49613.1|  314|Drosophila melanogaster
           palmitoyl-protein thioesterase 1 protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 164 NFLYINILHEENLQKLRKYANLKLLS 241
           N L+IN  + ENLQKL+K+  ++ L+
Sbjct: 215 NELFINKFYIENLQKLKKFVMVQFLN 240


>AE014298-1220|AAF46403.2|  314|Drosophila melanogaster CG12108-PA
           protein.
          Length = 314

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 164 NFLYINILHEENLQKLRKYANLKLLS 241
           N L+IN  + ENLQKL+K+  ++ L+
Sbjct: 215 NELFINKFYIENLQKLKKFVMVQFLN 240


>AE014134-630|AAF51090.1|  807|Drosophila melanogaster CG15415-PA
           protein.
          Length = 807

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +2

Query: 155 LHTNFLY-INILHEEN---LQKLRKYANLKLLSRIDMEFAG*TYQCTKDRKS 298
           LH +F   +N L  EN   LQKL +Y +L++ + + +     T +C +DR S
Sbjct: 133 LHDDFFARLNALELENCELLQKLAEYEDLRIANTLAVAEKEKTIECLQDRVS 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,274,367
Number of Sequences: 53049
Number of extensions: 312524
Number of successful extensions: 660
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)