Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0656
         (388 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g15300.1 68415.m01745 leucine-rich repeat transmembrane prote...    30   0.62 
At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,...    27   3.3  
At3g10290.1 68416.m01233 phosphate translocator-related low simi...    27   3.3  
At5g66550.1 68418.m08390 Maf family protein contains Pfam domain...    27   4.4  
At5g04160.1 68418.m00404 phosphate translocator-related low simi...    27   4.4  
At3g61680.1 68416.m06912 lipase class 3 family protein contains ...    27   5.8  
At1g05150.1 68414.m00518 calcium-binding EF hand family protein ...    27   5.8  

>At2g15300.1 68415.m01745 leucine-rich repeat transmembrane protein
           kinase, putative 
          Length = 744

 Score = 29.9 bits (64), Expect = 0.62
 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 293 KSEEHGTADVS--AKSGECTCGCGAWERRRYAES 388
           K  +H  AD     KS     GCG+W  RRY E+
Sbjct: 388 KKSKHNVADALEFTKSPPAKMGCGSWISRRYEET 421


>At3g13750.1 68416.m01735 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase precursor
           SP:P48980 from [Lycopersicon esculentum]
          Length = 847

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 231 NYFHE*TWSSLVEPISVRKIENLRNMGQQTSQLKVENAPV 350
           N+++   WS  + P     + N   +G QTS++K+   PV
Sbjct: 399 NHYNLPPWSISILPDCKNTVYNTARVGAQTSRMKMVRVPV 438


>At3g10290.1 68416.m01233 phosphate translocator-related low
           similarity to SP|P52178 Triose phosphate/phosphate
           translocator, non-green plastid, chloroplast precursor
           (CTPT) {Brassica oleracea},
           phosphoenolpyruvate/phosphate translocator precursor
           [Mesembryanthemum crystallinum] GI:9295275
          Length = 355

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -2

Query: 258 NSMSIRESSFKFAYFLNFCRFSSCRMFIYKKFV 160
           N   +    FKF  FL  C  S+C +  Y   V
Sbjct: 76  NKFLLSNYGFKFPIFLTMCHMSACAILSYVSIV 108


>At5g66550.1 68418.m08390 Maf family protein contains Pfam domain
           PF02545: Maf-like protein
          Length = 207

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 166 LLVYKHSTRGKPTKIKKIREFKTTFTNRHG 255
           ++VYK   R KPT  ++ REF   ++  HG
Sbjct: 89  VVVYKGVIREKPTTKEEAREFIKGYSGSHG 118


>At5g04160.1 68418.m00404 phosphate translocator-related low
           similarity to SP|P52178 Triose phosphate/phosphate
           translocator, non-green plastid, chloroplast precursor
           (CTPT) {Brassica oleracea},
           phosphoenolpyruvate/phosphate translocator precursor
           [Mesembryanthemum crystallinum] GI:9295275
          Length = 309

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -2

Query: 258 NSMSIRESSFKFAYFLNFCRFSSCRMFIYKKFV 160
           N   +    FKF  FL  C  S+C +  Y   V
Sbjct: 30  NKFLLSNYGFKFPIFLTMCHMSACAILSYISIV 62


>At3g61680.1 68416.m06912 lipase class 3 family protein contains
           Pfam profile PF01764: Lipase
          Length = 649

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 284 KDRKSEEHGTADVSAKSGECTCGC 355
           K  +  E G +DV+ +S + TCGC
Sbjct: 139 KREQKTESGNSDVAEESVDVTCGC 162


>At1g05150.1 68414.m00518 calcium-binding EF hand family protein low
           similarity to O-linked GlcNAc transferase [Homo sapiens]
            GI:2266994; contains Pfam profiles PF00036: EF hand,
           PF00515: TPR Domain
          Length = 808

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +3

Query: 294 NLRNMGQQTSQLKVENAPVDVEPGKEDAMLN 386
           +L +MG+    ++V    +D++PG  DA+ N
Sbjct: 387 SLHSMGEDERAIEVFQRAIDLKPGHVDALYN 417


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,022,311
Number of Sequences: 28952
Number of extensions: 154174
Number of successful extensions: 369
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 547638520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)