Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0654
(352 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 171 2e-43
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 171 2e-43
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 171 2e-43
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 171 2e-43
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 144 2e-35
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 144 2e-35
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 144 2e-35
BT024960-1|ABE01190.1| 458|Drosophila melanogaster IP15509p pro... 27 5.1
AY058684-1|AAL13913.1| 857|Drosophila melanogaster LD40216p pro... 27 5.1
AF203478-1|AAF18985.1| 857|Drosophila melanogaster Dalmatian pr... 27 5.1
AE014298-1519|AAF47971.2| 458|Drosophila melanogaster CG1637-PB... 27 5.1
AE014297-1011|AAF54430.1| 857|Drosophila melanogaster CG8374-PA... 27 5.1
AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-P... 27 5.1
BT022204-1|AAY51598.1| 179|Drosophila melanogaster IP01047p pro... 27 6.7
AF010256-1|AAB86598.1| 844|Drosophila melanogaster sparkling pr... 27 6.7
AE014135-193|AAX53600.1| 794|Drosophila melanogaster CG11049-PE... 27 6.7
AE014135-192|AAX53599.1| 628|Drosophila melanogaster CG11049-PG... 27 6.7
AE014135-191|AAX53598.1| 792|Drosophila melanogaster CG11049-PF... 27 6.7
AE014135-190|AAN06579.3| 647|Drosophila melanogaster CG11049-PC... 27 6.7
AE014135-189|AAX53597.1| 842|Drosophila melanogaster CG11049-PH... 27 6.7
AE014135-188|AAX53596.1| 680|Drosophila melanogaster CG11049-PD... 27 6.7
AE014135-187|AAF59385.3| 844|Drosophila melanogaster CG11049-PA... 27 6.7
AY094745-1|AAM11098.1| 892|Drosophila melanogaster GM03859p pro... 27 8.9
AY071649-1|AAL49271.1| 892|Drosophila melanogaster RE70955p pro... 27 8.9
AY060817-1|AAL28365.1| 721|Drosophila melanogaster GH28787p pro... 27 8.9
AY058772-1|AAL14001.1| 385|Drosophila melanogaster SD05480p pro... 27 8.9
AY051912-1|AAK93336.1| 801|Drosophila melanogaster LD39933p pro... 27 8.9
AF153209-1|AAD47349.1| 721|Drosophila melanogaster origin recog... 27 8.9
AF152093-1|AAD32712.2| 721|Drosophila melanogaster LATHEO protein. 27 8.9
AF139062-1|AAD39472.1| 721|Drosophila melanogaster origin recog... 27 8.9
AE014297-1777|AAF55005.1| 892|Drosophila melanogaster CG9925-PA... 27 8.9
AE014134-2350|AAF53302.2| 800|Drosophila melanogaster CG7110-PB... 27 8.9
AE013599-1658|AAM68599.1| 721|Drosophila melanogaster CG4088-PB... 27 8.9
AE013599-1657|AAF58411.1| 721|Drosophila melanogaster CG4088-PA... 27 8.9
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 171 bits (416), Expect = 2e-43
Identities = 82/114 (71%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 181
SHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE D
Sbjct: 13 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 72
Query: 182 RPGSKINKKEIVEAVTIIETPPMVLSVLLDTLR-PLMDYALC*LSGQEHMSEDC 340
RPGSKINKKE+VEAVT++ETPPM++ + + P AL + Q H+SE+C
Sbjct: 73 RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ-HLSEEC 125
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 171 bits (416), Expect = 2e-43
Identities = 82/114 (71%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 181
SHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE D
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 61
Query: 182 RPGSKINKKEIVEAVTIIETPPMVLSVLLDTLR-PLMDYALC*LSGQEHMSEDC 340
RPGSKINKKE+VEAVT++ETPPM++ + + P AL + Q H+SE+C
Sbjct: 62 RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ-HLSEEC 114
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 171 bits (416), Expect = 2e-43
Identities = 82/114 (71%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 181
SHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE D
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 61
Query: 182 RPGSKINKKEIVEAVTIIETPPMVLSVLLDTLR-PLMDYALC*LSGQEHMSEDC 340
RPGSKINKKE+VEAVT++ETPPM++ + + P AL + Q H+SE+C
Sbjct: 62 RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ-HLSEEC 114
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 171 bits (416), Expect = 2e-43
Identities = 82/114 (71%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 SHRKFSAPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPD 181
SHRKFSAPRHGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE D
Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREAD 61
Query: 182 RPGSKINKKEIVEAVTIIETPPMVLSVLLDTLR-PLMDYALC*LSGQEHMSEDC 340
RPGSKINKKE+VEAVT++ETPPM++ + + P AL + Q H+SE+C
Sbjct: 62 RPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ-HLSEEC 114
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 144 bits (350), Expect = 2e-35
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 38 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 217
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 218 EAVTIIETPPMVLSVLLDTLR-PLMDYALC*LSGQEHMSEDC 340
EAVT++ETPPM++ + + P AL + Q H+SE+C
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ-HLSEEC 101
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 144 bits (350), Expect = 2e-35
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 38 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 217
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 218 EAVTIIETPPMVLSVLLDTLR-PLMDYALC*LSGQEHMSEDC 340
EAVT++ETPPM++ + + P AL + Q H+SE+C
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ-HLSEEC 101
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 144 bits (350), Expect = 2e-35
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 38 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 217
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 218 EAVTIIETPPMVLSVLLDTLR-PLMDYALC*LSGQEHMSEDC 340
EAVT++ETPPM++ + + P AL + Q H+SE+C
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQ-HLSEEC 101
>BT024960-1|ABE01190.1| 458|Drosophila melanogaster IP15509p
protein.
Length = 458
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 20 APRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHL-TAFIGYKAG 154
A H +P + G +K P +DPS PVH+ T G K G
Sbjct: 352 AHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEG 397
>AY058684-1|AAL13913.1| 857|Drosophila melanogaster LD40216p
protein.
Length = 857
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 316 PRQSTERVVHEGSQCIQQHRQNHRRSLDDGD 224
P + E + HE S C H QNH + +D +
Sbjct: 458 PVEHAENIPHEESICPPLHEQNHDSNANDSN 488
>AF203478-1|AAF18985.1| 857|Drosophila melanogaster Dalmatian
protein.
Length = 857
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 316 PRQSTERVVHEGSQCIQQHRQNHRRSLDDGD 224
P + E + HE S C H QNH + +D +
Sbjct: 458 PVEHAENIPHEESICPPLHEQNHDSNANDSN 488
>AE014298-1519|AAF47971.2| 458|Drosophila melanogaster CG1637-PB,
isoform B protein.
Length = 458
Score = 27.5 bits (58), Expect = 5.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +2
Query: 20 APRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHL-TAFIGYKAG 154
A H +P + G +K P +DPS PVH+ T G K G
Sbjct: 352 AHEHSYERLWPIYDYKVRNGTLKDSPYNDPSAPVHIVTGSAGCKEG 397
>AE014297-1011|AAF54430.1| 857|Drosophila melanogaster CG8374-PA
protein.
Length = 857
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 316 PRQSTERVVHEGSQCIQQHRQNHRRSLDDGD 224
P + E + HE S C H QNH + +D +
Sbjct: 458 PVEHAENIPHEESICPPLHEQNHDSNANDSN 488
>AE014134-2707|AAN10938.1| 2282|Drosophila melanogaster CG31817-PA
protein.
Length = 2282
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 23 PRHGSMGFYPKKRSRRHRGKVKAFPKDDP 109
PR G YPK S RH K P+ DP
Sbjct: 1207 PRSGENPNYPKAHSARHYSKENYQPECDP 1235
>BT022204-1|AAY51598.1| 179|Drosophila melanogaster IP01047p
protein.
Length = 179
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AF010256-1|AAB86598.1| 844|Drosophila melanogaster sparkling
protein protein.
Length = 844
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AE014135-193|AAX53600.1| 794|Drosophila melanogaster CG11049-PE,
isoform E protein.
Length = 794
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AE014135-192|AAX53599.1| 628|Drosophila melanogaster CG11049-PG,
isoform G protein.
Length = 628
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AE014135-191|AAX53598.1| 792|Drosophila melanogaster CG11049-PF,
isoform F protein.
Length = 792
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AE014135-190|AAN06579.3| 647|Drosophila melanogaster CG11049-PC,
isoform C protein.
Length = 647
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AE014135-189|AAX53597.1| 842|Drosophila melanogaster CG11049-PH,
isoform H protein.
Length = 842
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AE014135-188|AAX53596.1| 680|Drosophila melanogaster CG11049-PD,
isoform D protein.
Length = 680
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AE014135-187|AAF59385.3| 844|Drosophila melanogaster CG11049-PA,
isoform A protein.
Length = 844
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 307 STERVVHEGSQCIQQHRQNHRRSLDDGDSLHDL 209
ST ++ H+ SQ +QQH H + D +LH+L
Sbjct: 42 STGQLEHD-SQHLQQHHLTHHQQQDVSPTLHNL 73
>AY094745-1|AAM11098.1| 892|Drosophila melanogaster GM03859p
protein.
Length = 892
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 231 MVTASTISFLLIFEPGRSGSLTTWVIPAL 145
MV A+T + L+F G S SLTT ++P +
Sbjct: 606 MVDATTSTVDLLFSSGDSRSLTTQMLPLI 634
>AY071649-1|AAL49271.1| 892|Drosophila melanogaster RE70955p
protein.
Length = 892
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 231 MVTASTISFLLIFEPGRSGSLTTWVIPAL 145
MV A+T + L+F G S SLTT ++P +
Sbjct: 606 MVDATTSTVDLLFSSGDSRSLTTQMLPLI 634
>AY060817-1|AAL28365.1| 721|Drosophila melanogaster GH28787p
protein.
Length = 721
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 331 RHML-LPRQSTERVVHEGSQCIQ-QHRQNHRRSLDDGDSLHDLFL 203
RH L P R + + Q I+ Q Q+H R+L D +H+LF+
Sbjct: 551 RHQLNTPTTQFGRALQKTLQLIETQIVQDHLRALQDAPPIHELFV 595
>AY058772-1|AAL14001.1| 385|Drosophila melanogaster SD05480p
protein.
Length = 385
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 347 TSDSLQTYAPAQTVNRARSP*GVSMYPTTPTKPS 246
TS +L +P +VN AR+ + Y TP KPS
Sbjct: 179 TSSNLTDVSPPYSVNIARNSVFHADYKATPVKPS 212
>AY051912-1|AAK93336.1| 801|Drosophila melanogaster LD39933p
protein.
Length = 801
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 347 TSDSLQTYAPAQTVNRARSP*GVSMYPTTPTKPS 246
TS +L +P +VN AR+ + Y TP KPS
Sbjct: 619 TSSNLTDVSPPYSVNIARNSVFHADYKATPVKPS 652
>AF153209-1|AAD47349.1| 721|Drosophila melanogaster origin
recognition complex subunit protein.
Length = 721
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 331 RHML-LPRQSTERVVHEGSQCIQ-QHRQNHRRSLDDGDSLHDLFL 203
RH L P R + + Q I+ Q Q+H R+L D +H+LF+
Sbjct: 551 RHQLNTPTTQFGRALQKTLQLIETQIVQDHLRALQDAPPIHELFV 595
>AF152093-1|AAD32712.2| 721|Drosophila melanogaster LATHEO protein.
Length = 721
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 331 RHML-LPRQSTERVVHEGSQCIQ-QHRQNHRRSLDDGDSLHDLFL 203
RH L P R + + Q I+ Q Q+H R+L D +H+LF+
Sbjct: 551 RHQLNTPTTQFGRALQKTLQLIETQIVQDHLRALQDAPPIHELFV 595
>AF139062-1|AAD39472.1| 721|Drosophila melanogaster origin
recognition complex subunit3 protein.
Length = 721
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 331 RHML-LPRQSTERVVHEGSQCIQ-QHRQNHRRSLDDGDSLHDLFL 203
RH L P R + + Q I+ Q Q+H R+L D +H+LF+
Sbjct: 551 RHQLNTPTTQFGRALQKTLQLIETQIVQDHLRALQDAPPIHELFV 595
>AE014297-1777|AAF55005.1| 892|Drosophila melanogaster CG9925-PA
protein.
Length = 892
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 231 MVTASTISFLLIFEPGRSGSLTTWVIPAL 145
MV A+T + L+F G S SLTT ++P +
Sbjct: 606 MVDATTSTVDLLFSSGDSRSLTTQMLPLI 634
>AE014134-2350|AAF53302.2| 800|Drosophila melanogaster CG7110-PB
protein.
Length = 800
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 347 TSDSLQTYAPAQTVNRARSP*GVSMYPTTPTKPS 246
TS +L +P +VN AR+ + Y TP KPS
Sbjct: 619 TSSNLTDVSPPYSVNIARNSVFHADYKATPVKPS 652
>AE013599-1658|AAM68599.1| 721|Drosophila melanogaster CG4088-PB,
isoform B protein.
Length = 721
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 331 RHML-LPRQSTERVVHEGSQCIQ-QHRQNHRRSLDDGDSLHDLFL 203
RH L P R + + Q I+ Q Q+H R+L D +H+LF+
Sbjct: 551 RHQLNTPTTQFGRALQKTLQLIETQIVQDHLRALQDAPPIHELFV 595
>AE013599-1657|AAF58411.1| 721|Drosophila melanogaster CG4088-PA,
isoform A protein.
Length = 721
Score = 26.6 bits (56), Expect = 8.9
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 331 RHML-LPRQSTERVVHEGSQCIQ-QHRQNHRRSLDDGDSLHDLFL 203
RH L P R + + Q I+ Q Q+H R+L D +H+LF+
Sbjct: 551 RHQLNTPTTQFGRALQKTLQLIETQIVQDHLRALQDAPPIHELFV 595
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,397,868
Number of Sequences: 53049
Number of extensions: 363555
Number of successful extensions: 955
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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