Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0651
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   3.8  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   6.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   8.7  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 602 YPRGLTDPTSLRSCK 646
           + R +TDP ++R CK
Sbjct: 140 FGRRITDPINIRKCK 154


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 153 CELQLYNYV 179
           CEL +YNYV
Sbjct: 123 CELAMYNYV 131


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 153 CELQLYNYV 179
           CEL +YNYV
Sbjct: 356 CELAMYNYV 364


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 153 CELQLYNYV 179
           CEL +YNYV
Sbjct: 356 CELAMYNYV 364


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 554 GLKGGVAVVTILRP*TDVSRWVAHLRRR 471
           G K  +A++T +   T VS W A+ RRR
Sbjct: 115 GEKIMLAIITKMTL-TQVSTWFANARRR 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,773
Number of Sequences: 336
Number of extensions: 2628
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)