Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0651
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92827-3|CAB07328.1|  191|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z92827-3|CAB07328.1|  191|Caenorhabditis elegans Hypothetical
           protein C29F7.3 protein.
          Length = 191

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +2

Query: 407 CLDRGRAHSSPGVKWLLKPIDIYDANAPPTLRHQSKVSV 523
           CL RG+  +   V+ L K ++ Y+ +  P + H  KV +
Sbjct: 126 CLHRGQGRTDDNVESLKKRVETYNQSTFPIIEHFEKVGM 164


>Z81039-3|CAB02775.1|  325|Caenorhabditis elegans Hypothetical
           protein C25D7.4 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/55 (21%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = -1

Query: 171 YIVAVHSFNNFKELTLNLSTSYIL-SV*VKNIVI*DPENYKDCYLKYTCKLLENK 10
           +  ++ +  NF++  +NL T  +  +V +KNI++ +  N+  C ++Y+ + + ++
Sbjct: 226 FYTSIENLFNFRKFEINLETFTVADAVKIKNILL-NSANFNYCKIEYSMQFVAHR 279


>Z19158-4|CAJ76964.1|  719|Caenorhabditis elegans Hypothetical
           protein T23G5.2a protein.
          Length = 719

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 437 PGVKWLLKPIDIYDANAPPTL 499
           PGV+ LLK I+I +AN P T+
Sbjct: 409 PGVQCLLKIIEIVEANYPETM 429


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,215,543
Number of Sequences: 27780
Number of extensions: 248507
Number of successful extensions: 402
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)