Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0650
(620 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 157 9e-39
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 156 1e-38
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 156 1e-38
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 156 2e-38
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 154 5e-38
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 151 3e-37
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 148 4e-36
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 146 1e-35
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 139 2e-33
12_02_1282 + 27528159-27529148,27529549-27529614 79 2e-15
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 72 4e-13
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 66 2e-11
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 63 1e-10
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 56 2e-08
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 47 1e-05
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 45 4e-05
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 45 6e-05
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 42 4e-04
02_01_0752 - 5583757-5584092 30 1.3
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 30 1.7
09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283 29 2.3
07_03_0630 - 20097672-20097772,20097983-20102012 29 2.3
07_03_0572 - 19604643-19604745,19604947-19605629,19605786-196062... 29 2.3
11_06_0126 - 20378611-20379719,20380081-20381239 29 3.0
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.0
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 29 3.9
10_01_0294 + 3052598-3052759,3052817-3053311 28 5.2
09_02_0456 - 9525067-9525422,9525679-9528226 28 6.9
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 28 6.9
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 28 6.9
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 27 9.1
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 157 bits (380), Expect = 9e-39
Identities = 76/100 (76%), Positives = 83/100 (83%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
ETTYNS + L ++GGTTM+PGIADRM KEITALAPS+MKIK++APPER
Sbjct: 275 ETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPER 334
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 335 KYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 156 bits (379), Expect = 1e-38
Identities = 75/100 (75%), Positives = 83/100 (83%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
ETTYNS + L ++GGTTM+PGIADRM KEITALAPS+MKIK++APPER
Sbjct: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPER 337
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 156 bits (379), Expect = 1e-38
Identities = 75/100 (75%), Positives = 83/100 (83%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
ETTYNS + L ++GGTTM+PGIADRM KEITALAPS+MKIK++APPER
Sbjct: 278 ETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPER 337
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 156 bits (378), Expect = 2e-38
Identities = 75/100 (75%), Positives = 83/100 (83%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
ETTYNS + L ++GGTTM+PGIADRM KEITALAPS+MKIK++APPER
Sbjct: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPER 337
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 154 bits (374), Expect = 5e-38
Identities = 74/100 (74%), Positives = 83/100 (83%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
ETTYNS + L ++GG+TM+PGIADRM KEITALAPS+MKIK++APPER
Sbjct: 281 ETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPER 340
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 341 KYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 151 bits (367), Expect = 3e-37
Identities = 72/100 (72%), Positives = 83/100 (83%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
ETTYNS + L ++GG+TM+PGIADRM KEITALAPS+MKIK++APPER
Sbjct: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPER 337
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 148 bits (358), Expect = 4e-36
Identities = 71/100 (71%), Positives = 80/100 (80%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
E TYNS + L ++GG+TM+PGIADRM KEIT+LAPS+MK+K+IAPPER
Sbjct: 277 EATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPER 336
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 146 bits (354), Expect = 1e-35
Identities = 70/100 (70%), Positives = 78/100 (78%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
E TYNS + L ++GG+TM+PGI DRM KEITALAP +MKIK++APPER
Sbjct: 277 EATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPER 336
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 139 bits (336), Expect = 2e-33
Identities = 74/114 (64%), Positives = 83/114 (72%), Gaps = 14/114 (12%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
ETTYNS + L ++GG+TM+PGIADRM KEITALAPS+MKIK++APPER
Sbjct: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPER 337
Query: 401 KYSVWIGGSILASLSTFQ--------------QMWISKQEYDESGPSIVHRKCF 282
KYSVWIGGSILASLSTFQ QMWISK EYDESGP+IVHRKCF
Sbjct: 338 KYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEYDESGPAIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 79.4 bits (187), Expect = 2e-15
Identities = 51/100 (51%), Positives = 57/100 (57%)
Frame = -1
Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
ETTYNS + L ++GGTTM+PGIADRM KEITALAPS+MKIK
Sbjct: 278 ETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK------- 330
Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
MWI+K EYDESGPSIVHRKCF
Sbjct: 331 -------------------MWIAKAEYDESGPSIVHRKCF 351
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 71.7 bits (168), Expect = 4e-13
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Frame = -1
Query: 530 LVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYSVWIGGSIL 369
L+ + GGT G DR Q+E L+ S + ++ PPE +YS W+GG+IL
Sbjct: 311 LLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYSAWLGGAIL 369
Query: 368 ASLSTFQQMWISKQEYDESGPSIVHRKCF 282
A + Q ++K +YDE+GPSIVH+KCF
Sbjct: 370 AKVVFPQNQHVTKGDYDETGPSIVHKKCF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = -1
Query: 512 IAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 333
+ GG+T++P +R++KE+ L P ++KIIA + W GGS+LA F+ M I+
Sbjct: 352 LTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCIT 411
Query: 332 KQEYDESGPSIVHRKCF 282
K EY+E G R+ F
Sbjct: 412 KSEYEEMGSMRCRRRFF 428
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Frame = -1
Query: 512 IAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQM 342
++GG++ + +R++KE+ + ++K++A ER++SVWIGGSILASL +FQQM
Sbjct: 404 LSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGSILASLGSFQQM 463
Query: 341 WISKQE 324
W SK +
Sbjct: 464 WFSKAD 469
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -2
Query: 598 SLRHPPRPHITPIMKCDVDIRKDLYANTVL 509
S+R PR I + +CDVDIRK+L ++ +L
Sbjct: 375 SVRGLPRMVIDSVNRCDVDIRKELLSSILL 404
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/80 (32%), Positives = 52/80 (65%), Gaps = 7/80 (8%)
Frame = -1
Query: 512 IAGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW 339
++GG++ PG+++R++KE+ L P+ + I++I PP S W G +++++STF + W
Sbjct: 403 LSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAW 462
Query: 338 -ISKQEYDE----SGPSIVH 294
I K+++ + +GPS V+
Sbjct: 463 CIKKKQFRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = -1
Query: 434 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 300
+++ +++ P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 418 IEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = -1
Query: 512 IAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 333
+ GG ++ PG+ R++ I P +K++ + W G + A+ S F + S
Sbjct: 628 VTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFS 687
Query: 332 KQEYDESGPSIVHRK 288
+Y E G ++ HRK
Sbjct: 688 LADYREHGENLFHRK 702
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 14/85 (16%)
Frame = -1
Query: 512 IAGGTTMYPGIADRMQKEITALAP--------------STMKIKIIAPPERKYSVWIGGS 375
++GG+TM+ R+Q +I + +++ ++A P + Y+ W GGS
Sbjct: 345 LSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYAAWFGGS 404
Query: 374 ILASLSTFQQMWISKQEYDESGPSI 300
+ AS F + +K+EY+E G SI
Sbjct: 405 VAASNPEFYESCHTKEEYEEHGASI 429
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 11/62 (17%)
Frame = -1
Query: 512 IAGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVWIGGSILA 366
++GG+TMYPG+ R++KE+ L + ++++I PP RK+ V++GG++LA
Sbjct: 329 LSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLA 388
Query: 365 SL 360
+
Sbjct: 389 GI 390
>02_01_0752 - 5583757-5584092
Length = 111
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +2
Query: 461 PFAYGRRFQGTWWYHRQYGVGVQVLTDVHVALHDGSYMWSRGM 589
P A GRR + WW +Q LTD + GSY W R M
Sbjct: 5 PPAGGRRQRAWWWGASDTDTQIQALTDGYNVGEGGSY-WGRCM 46
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -2
Query: 403 GSTPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLHSPRPAA 236
G G D ++ L G S +P TGSA++R RR L P PAA
Sbjct: 41 GGGEAGVGDEAAELGLEVGGVGLTGASVARASPSPETGSAARRRRRRGLAKPLPAA 96
>09_02_0557 + 10639845-10639900,10640372-10640647,10640998-10641283
Length = 205
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/80 (27%), Positives = 34/80 (42%)
Frame = +1
Query: 358 EREARIDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPAIRCWRTSPY 537
+R DP T ++GG+ I + G+ + C RSA P PPA C P
Sbjct: 22 KRHIARDPDAGTASVIAGGSAAKIAVGSGSGSPADLCRRSARPS---TPPA-ACQPEPPA 77
Query: 538 GCPRRTS*WELYVVSGDAAS 597
P+ + V++G A+
Sbjct: 78 PTPKAPNTSTALVIAGGGAA 97
>07_03_0630 - 20097672-20097772,20097983-20102012
Length = 1376
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 567 LPS*SATWTSVRTCTPTPYCRWYHHVPWNRRP 472
LPS ++ +S+R CT YC W + +P N P
Sbjct: 1118 LPSSLSSLSSLRRCT-LKYCHWMYSIPPNSLP 1148
>07_03_0572 -
19604643-19604745,19604947-19605629,19605786-19606284,
19606370-19606878,19607110-19607148,19607347-19607411,
19609081-19609201,19610229-19610315,19611096-19611179,
19611925-19612175,19612869-19612962,19613043-19613284,
19614187-19614505
Length = 1031
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 334 RNKSTTSLAPPLYTGSASKRTARRCLHSPRPAAQFRLVISVN 209
R ++ +P L G +R R C +P A+FR V++ N
Sbjct: 35 RGRARAPASPGLLGGRRGRRPRRACEEEEKPQARFRRVVADN 76
>11_06_0126 - 20378611-20379719,20380081-20381239
Length = 755
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 378 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDSRVHGG 500
++DP G+L W+ +D + CRW G +C L V ++GG
Sbjct: 48 TSDPLGLLTSWKEDDHDC-CRWRGVTCSNLTGHVLRLHLNGG 88
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 378 STDPYGVLPLWRSNDLNLHCRW-GESC 455
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -1
Query: 494 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 363
MYP D +K+ L K APPER+++ S+L S
Sbjct: 255 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHNSLPRPSVLYS 298
>10_01_0294 + 3052598-3052759,3052817-3053311
Length = 218
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 533 GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 411
G + +H+ AG + G+ + IT + PST + +AP
Sbjct: 176 GSIAEHQAAGPVYLQGGVFPNYRSLITDVQPSTQAVTSVAP 216
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.9 bits (59), Expect = 6.9
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +3
Query: 381 TDPYGVLPLWRSNDLNLHCRWGE-SCDFLL--HTVGDSRVHGGTTGNTVLA 524
TDP L WR +DL CRW +CD V D V G G LA
Sbjct: 46 TDPTAALSAWRGDDL---CRWPHVACDAAAGNAAVSDGVVAGLYLGGLYLA 93
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 494 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 393
MYP D +K+ L K APPER+++
Sbjct: 350 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 383
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 394 PYGSVDRSSPPSLPSNKCGS 335
P+ V SSPP+LP KCG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 345 LLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWG 446
+L+ E S P +LPL NDL+ RWG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWG 435
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,944,759
Number of Sequences: 37544
Number of extensions: 443186
Number of successful extensions: 1399
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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