Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0650
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         166   4e-43
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         166   4e-43
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         166   4e-43
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          154   2e-39
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   1.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.4  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  166 bits (404), Expect = 4e-43
 Identities = 82/100 (82%), Positives = 85/100 (85%)
 Frame = -1

Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
           ETTYNS  +        L     ++GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 336

Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
           KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 28.3 bits (60), Expect = 0.21
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -3

Query: 618 PSFLGMEACGI 586
           PSFLGMEACGI
Sbjct: 265 PSFLGMEACGI 275


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  166 bits (404), Expect = 4e-43
 Identities = 82/100 (82%), Positives = 85/100 (85%)
 Frame = -1

Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
           ETTYNS  +        L     ++GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 336

Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
           KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 28.3 bits (60), Expect = 0.21
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -3

Query: 618 PSFLGMEACGI 586
           PSFLGMEACGI
Sbjct: 265 PSFLGMEACGI 275


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  166 bits (404), Expect = 4e-43
 Identities = 82/100 (82%), Positives = 85/100 (85%)
 Frame = -1

Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
           ETTYNS  +        L     ++GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER
Sbjct: 277 ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 336

Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
           KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376



 Score = 28.3 bits (60), Expect = 0.21
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -3

Query: 618 PSFLGMEACGI 586
           PSFLGMEACGI
Sbjct: 265 PSFLGMEACGI 275


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  154 bits (373), Expect = 2e-39
 Identities = 75/100 (75%), Positives = 79/100 (79%)
 Frame = -1

Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
           ET YNS           L     ++GGTTMYPGIADRMQKEIT+LAPST+KIKIIAPPER
Sbjct: 277 ETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPER 336

Query: 401 KYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 282
           KYSVWIGGSILASLSTFQ MWISK EYDE GP IVHRKCF
Sbjct: 337 KYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = -3

Query: 618 PSFLGMEACGI 586
           PSFLGME+ GI
Sbjct: 265 PSFLGMESTGI 275


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 263 LPPQPAAGCSIQACN 219
           LPP+  AGC+ Q C+
Sbjct: 167 LPPEDGAGCATQPCS 181


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 540 SVRTCTPTPYCRWYHHVPWNRRPY 469
           +VR C PTP  R  ++  W  RP+
Sbjct: 230 TVRLCLPTPPNRLTNNGYWQLRPH 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,044
Number of Sequences: 2352
Number of extensions: 15906
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)