Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0650
         (620 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             127   1e-31
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.79 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.79 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          25   0.79 
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.7  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  127 bits (306), Expect = 1e-31
 Identities = 64/83 (77%), Positives = 68/83 (81%)
 Frame = -1

Query: 581 ETTYNSHHEVRRGHP*GLVRQHRIAGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 402
           ETTYNS  +        L     ++GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+
Sbjct: 51  ETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEK 110

Query: 401 KYSVWIGGSILASLSTFQQMWIS 333
           KYSVWIGGSILASLSTFQQMWIS
Sbjct: 111 KYSVWIGGSILASLSTFQQMWIS 133



 Score = 28.3 bits (60), Expect = 0.064
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -3

Query: 618 PSFLGMEACGI 586
           PSFLGMEACGI
Sbjct: 39  PSFLGMEACGI 49


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 448 RAVISFCIRSAIPGYMVVPPAIRCWRTS 531
           R V+ F   S +  Y VVP A++ W TS
Sbjct: 385 RKVLGFGYESNVK-YQVVPSALQMWSTS 411


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 448 RAVISFCIRSAIPGYMVVPPAIRCWRTS 531
           R V+ F   S +  Y VVP A++ W TS
Sbjct: 385 RKVLGFGYESNVK-YQVVPSALQMWSTS 411


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 448 RAVISFCIRSAIPGYMVVPPAIRCWRTS 531
           R V+ F   S +  Y VVP A++ W TS
Sbjct: 11  RKVLGFGYESNVK-YQVVPSALQMWSTS 37


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -1

Query: 263 LPPQPAAGCSIQACN 219
           +P  P  GC  + CN
Sbjct: 427 IPDDPPIGCECKTCN 441


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 537  RMSTSHFMMGVICG 578
            R +TSH + G++CG
Sbjct: 1455 RHATSHELKGLLCG 1468


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 537  RMSTSHFMMGVICG 578
            R +TSH + G++CG
Sbjct: 1451 RHATSHELKGLLCG 1464


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 353 FQQMWISKQEYDESGPSIVHRK 288
           F+Q W S Q Y +    +V R+
Sbjct: 151 FRQNWASLQPYKKLSVEVVRRE 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,305
Number of Sequences: 438
Number of extensions: 4516
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)