Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0648
(604 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 297 6e-81
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 292 1e-79
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 292 1e-79
SB_56| Best HMM Match : Actin (HMM E-Value=0) 291 4e-79
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 289 9e-79
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 181 5e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 2e-32
SB_54| Best HMM Match : Actin (HMM E-Value=0) 84 1e-16
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 66 3e-11
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 65 5e-11
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 61 6e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 57 1e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 48 6e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 40 0.002
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.54
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 0.95
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 30 1.3
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.7
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 2.2
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 2.2
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.2
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 29 2.9
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.9
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 29 3.8
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_27940| Best HMM Match : IncA (HMM E-Value=0.41) 28 5.1
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_14157| Best HMM Match : IncA (HMM E-Value=0.2) 28 5.1
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_873| Best HMM Match : DUF1269 (HMM E-Value=0.31) 28 5.1
SB_54874| Best HMM Match : Toxin_28 (HMM E-Value=1.3) 28 5.1
SB_21817| Best HMM Match : Tim17 (HMM E-Value=2.4) 28 5.1
SB_11550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 297 bits (728), Expect = 6e-81
Identities = 135/139 (97%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFN+PAMYVAIQA
Sbjct: 121 TQIMFETFNSPAMYVAIQA 139
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 175
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 292 bits (717), Expect = 1e-79
Identities = 134/139 (96%), Positives = 137/139 (98%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFN+PAMYVAIQA
Sbjct: 121 TQIMFETFNSPAMYVAIQA 139
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 175
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 292 bits (717), Expect = 1e-79
Identities = 132/139 (94%), Positives = 137/139 (98%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFN+PAMYVAIQA
Sbjct: 121 TQIMFETFNSPAMYVAIQA 139
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/29 (86%), Positives = 27/29 (93%), Gaps = 2/29 (6%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYE--GYA 590
ASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 145 ASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 291 bits (713), Expect = 4e-79
Identities = 133/137 (97%), Positives = 136/137 (99%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSK 264
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 265 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 444
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 445 IMFETFNTPAMYVAIQA 495
IMFETFN+PAMYVAIQA
Sbjct: 122 IMFETFNSPAMYVAIQA 138
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 174
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 289 bits (710), Expect = 9e-79
Identities = 132/137 (96%), Positives = 136/137 (99%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSK 264
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 265 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 444
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 445 IMFETFNTPAMYVAIQA 495
IMFETFN+PAMYVAIQA
Sbjct: 122 IMFETFNSPAMYVAIQA 138
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 174
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 181 bits (440), Expect = 5e-46
Identities = 82/89 (92%), Positives = 85/89 (95%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSK 264
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 265 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 351
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 107 ASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 424 NREKMTQIMFETFNTPAMYVAIQA 495
N + M +IMFETFN+PAMYVAIQA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQA 101
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 135 bits (327), Expect = 2e-32
Identities = 64/136 (47%), Positives = 90/136 (66%), Gaps = 3/136 (2%)
Frame = +1
Query: 97 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEASSKRG 270
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEAS R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 271 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 448 MFETFNTPAMYVAIQA 495
MFE + +Y+AIQA
Sbjct: 127 MFENYQFEGVYIAIQA 142
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPH 599
A G TG+V+DSGDGV+H P+YEG+ALPH
Sbjct: 148 AQGLLTGVVIDSGDGVTHICPVYEGFALPH 177
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +1
Query: 331 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 495
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QA
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQA 2183
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 204
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG V D GDGVSHTVP+Y+GY LPHA
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHA 2219
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 65.7 bits (153), Expect = 3e-11
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+V DSGDGVSH VPIYEGYALPHA
Sbjct: 23 ASGRTTGVVFDSGDGVSHNVPIYEGYALPHA 53
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 445 IMFETFNTPAMYVAIQA 495
IMFE FN+PA+YVAIQA
Sbjct: 1 IMFEAFNSPAVYVAIQA 17
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 64.9 bits (151), Expect = 5e-11
Identities = 25/39 (64%), Positives = 34/39 (87%)
Frame = +1
Query: 379 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 495
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQA 164
Score = 61.7 bits (143), Expect = 4e-10
Identities = 24/31 (77%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
A+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+
Sbjct: 170 ATGRTTGVVLDAGDGVSHSVPIYEGFAMPHS 200
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 61.3 bits (142), Expect = 6e-10
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +1
Query: 289 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 468
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 469 PAMYV 483
PA ++
Sbjct: 63 PAFFL 67
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 504 AVASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
A A+GR+ G+V+DSG + VP+++GY L A
Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVLQQA 107
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 204
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +1
Query: 73 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 243
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 244 GDEASSKRGILTL 282
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPH 599
ASG T G+ L SG + IYEG+ L H
Sbjct: 774 ASGMTLGVCLSSGFSCTQAAVIYEGHTLNH 803
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +1
Query: 217 GMGQKDSYVGDEASSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 396
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.31
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 525 TGIVLDSGDGVSHTVPI 575
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +1
Query: 91 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRG 270
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 271 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 360
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 201 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 85
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 525 TGIVLDSGDGVSHTVPIYEGYAL 593
TG V+DSGDGV+H +P+ EGY +
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVI 84
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 241 VGDEASSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPL 411
VG++ S I L+ P + +VT+++ E++ H F + P HPV++TE
Sbjct: 117 VGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVC 176
Query: 412 NPKANRE 432
NP R+
Sbjct: 177 NPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 176 GNTARGASSPAKPALHIPEPLSTT 105
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 176 GNTARGASSPAKPALHIPEPLSTT 105
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 449 CSKHSTRPPCTSPSKPCSRCRVRSYHRYRAG 541
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 176 GNTARGASSPAKPALHIPEPLSTT 105
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 405 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 497
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Frame = +3
Query: 369 RPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAV------ASGRTTG 530
R R P PA+ ++R P I H R VR+ RA AV ASG G
Sbjct: 82 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGVAAG 141
Query: 531 IVLDSGDGVS 560
++ +G GVS
Sbjct: 142 VLSSAGLGVS 151
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 234 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 124
V+LSH + H M D +HG RS SCET L T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 234 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 124
V+LSH + H M D +HG RS SCET L T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 234 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 124
V+LSH + H M D +HG RS SCET L T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 234 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 124
V+LSH + H M D +HG RS SCET L T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 234 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 124
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 234 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 124
V+LSH + H M D +HG RS SCET L T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 234 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 124
V+LSH + H M D +HG RS SCET L T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 363 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVASGRTTGIVLD 542
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 543 SGDGVSHTVPI 575
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 234 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 124
++LSH + H M D +HG RS SCET L T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 290 GYLRVRIPLLLLASSPT*ESFCPIPTITP*WRGLPT 183
G + +++ LLLL+SSP S PI TP +GL T
Sbjct: 275 GVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 423 QQREDDPDHVRNIQHARHVRRHPSRALAVASGRTTGIVLDSGDGVSHTVPIYEGYALPH 599
Q+R D V N+ H R + +A+ SG+T+ S D V PI G LPH
Sbjct: 210 QERRSTHDVVPNLGHGVASRHAQASPIAMTSGKTS----QSTDAVCRRPPIERG-TLPH 263
>SB_50059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 458 HSTRPPCTSPSKPCSRCRV-RSYHRYRAGLRRRCLPHRAHLRRIRTS 595
HS RPP P RCR+ ++ H YR G R A R++ TS
Sbjct: 44 HSKRPPPRRWKAPLQRCRMSQTQHGYRQG---RAYTFSAPSRKLCTS 87
>SB_27940| Best HMM Match : IncA (HMM E-Value=0.41)
Length = 418
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +3
Query: 384 PSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAV------ASGRTTGIVLDS 545
P PA+ ++R P I H R VR+ RA AV ASG G++ +
Sbjct: 223 PPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGIVAGVLSSA 282
Query: 546 GDGVS 560
G GVS
Sbjct: 283 GLGVS 287
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 176 GNTARGASSPAKPALHIPEPLSTT 105
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_14157| Best HMM Match : IncA (HMM E-Value=0.2)
Length = 556
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +3
Query: 369 RPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAV------ASGRTTG 530
R R P PA+ ++R P I H R VR+ RA AV ASG G
Sbjct: 209 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGIAAG 268
Query: 531 IVLDSGDGVS 560
+ +G GVS
Sbjct: 269 ALSGAGLGVS 278
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 176 GNTARGASSPAKPALHIPEPLSTT 105
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_873| Best HMM Match : DUF1269 (HMM E-Value=0.31)
Length = 322
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +3
Query: 384 PSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAV------ASGRTTGIVLDS 545
P PA+ ++R P I H R VR+ RA AV ASG G++ +
Sbjct: 107 PPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGIVAGVLSSA 166
Query: 546 GDGVS 560
G GVS
Sbjct: 167 GLGVS 171
>SB_54874| Best HMM Match : Toxin_28 (HMM E-Value=1.3)
Length = 506
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +3
Query: 384 PSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAV------ASGRTTGIVLDS 545
P PA+ ++R P I H R VR+ RA AV ASG G++ +
Sbjct: 424 PPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGIAAGVLSSA 483
Query: 546 GDGVS 560
G GVS
Sbjct: 484 GLGVS 488
>SB_21817| Best HMM Match : Tim17 (HMM E-Value=2.4)
Length = 293
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +3
Query: 369 RPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAV------ASGRTTG 530
R R P PA+ ++R P I H R VR+ RA AV ASG G
Sbjct: 151 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGIAAG 210
Query: 531 IVLDSGDGVS 560
+ +G GVS
Sbjct: 211 ALSGAGLGVS 220
>SB_11550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 28.3 bits (60), Expect = 5.1
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = +3
Query: 384 PSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAV------ASGRTTGIVLDS 545
P PA+ ++R P I H R VR+ RA AV ASG G++ +
Sbjct: 223 PPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGIVAGVLSSA 282
Query: 546 GDGVS 560
G GVS
Sbjct: 283 GLGVS 287
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -3
Query: 191 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 81
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 247 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 101
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 253 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 83
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,841,029
Number of Sequences: 59808
Number of extensions: 536956
Number of successful extensions: 2092
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2081
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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