Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0648
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 299 7e-82
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 299 7e-82
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 299 7e-82
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 299 7e-82
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 299 7e-82
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 299 7e-82
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 298 2e-81
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 297 5e-81
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 289 1e-78
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 261 3e-70
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 206 7e-54
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 184 3e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 184 3e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 183 8e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 177 4e-45
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 169 2e-42
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 137 5e-33
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 120 6e-28
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 78 4e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 4e-07
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 35 0.051
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.16
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.21
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical ... 28 5.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 299 bits (735), Expect = 7e-82
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFNTPAMYVAIQA
Sbjct: 121 TQIMFETFNTPAMYVAIQA 139
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 299 bits (735), Expect = 7e-82
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFNTPAMYVAIQA
Sbjct: 121 TQIMFETFNTPAMYVAIQA 139
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 299 bits (735), Expect = 7e-82
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFNTPAMYVAIQA
Sbjct: 121 TQIMFETFNTPAMYVAIQA 139
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 299 bits (735), Expect = 7e-82
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFNTPAMYVAIQA
Sbjct: 121 TQIMFETFNTPAMYVAIQA 139
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 299 bits (735), Expect = 7e-82
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFNTPAMYVAIQA
Sbjct: 121 TQIMFETFNTPAMYVAIQA 139
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 299 bits (735), Expect = 7e-82
Identities = 137/139 (98%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFNTPAMYVAIQA
Sbjct: 121 TQIMFETFNTPAMYVAIQA 139
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 175
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 298 bits (732), Expect = 2e-81
Identities = 136/139 (97%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFNTPAMYVAIQA
Sbjct: 121 TQIMFETFNTPAMYVAIQA 139
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 297 bits (728), Expect = 5e-81
Identities = 134/139 (96%), Positives = 138/139 (99%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 438
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 439 TQIMFETFNTPAMYVAIQA 495
TQIMFETFNTPAMYVAIQA
Sbjct: 121 TQIMFETFNTPAMYVAIQA 139
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGV+HTVPIYEGYALPHA
Sbjct: 145 ASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 289 bits (709), Expect = 1e-78
Identities = 131/137 (95%), Positives = 135/137 (98%)
Frame = +1
Query: 85 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSK 264
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 265 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 444
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 445 IMFETFNTPAMYVAIQA 495
IMFETFNTPAMYV IQA
Sbjct: 122 IMFETFNTPAMYVNIQA 138
Score = 67.3 bits (157), Expect = 8e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLD+GDGV+HTVPIYEGYALPHA
Sbjct: 144 ASGRTTGIVLDTGDGVTHTVPIYEGYALPHA 174
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 261 bits (639), Expect = 3e-70
Identities = 119/121 (98%), Positives = 120/121 (99%)
Frame = +1
Query: 133 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGILTLKYPIEHGIVT 312
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 313 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 492
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 493 A 495
A
Sbjct: 125 A 125
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHA
Sbjct: 131 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 161
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 206 bits (504), Expect = 7e-54
Identities = 94/95 (98%), Positives = 94/95 (98%)
Frame = +1
Query: 211 MVGMGQKDSYVGDEASSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 390
MVGMGQKDSYVGDEA SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 391 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 495
LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 95
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG+VLDSGDGV+HTVPIYEGYALPHA
Sbjct: 101 ASGRTTGVVLDSGDGVTHTVPIYEGYALPHA 131
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 184 bits (449), Expect = 3e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKI 336
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 184 bits (449), Expect = 3e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKI 336
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 183 bits (446), Expect = 8e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDMEKI 336
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 177 bits (432), Expect = 4e-45
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAS 258
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 259 SKRGILTLKYPIEHGIVTNWDDM 327
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 169 bits (410), Expect = 2e-42
Identities = 72/132 (54%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGILTL 282
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 283 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 459
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 460 FNTPAMYVAIQA 495
FN PA+Y+ +QA
Sbjct: 131 FNVPALYIQMQA 142
Score = 54.4 bits (125), Expect = 6e-08
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
A+GRTTG+VLDSGDGV+H VPI +G+A+ HA
Sbjct: 148 ATGRTTGVVLDSGDGVTHAVPIVKGFAMKHA 178
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 137 bits (332), Expect = 5e-33
Identities = 68/134 (50%), Positives = 92/134 (68%), Gaps = 3/134 (2%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEASSKRGIL 276
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E S R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 277 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 453
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 454 ETFNTPAMYVAIQA 495
E + ++YVA+QA
Sbjct: 129 EQYGFNSIYVAVQA 142
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPH 599
A G TG+V+DSGDGV+H P+YEG+AL H
Sbjct: 148 AQGLLTGVVVDSGDGVTHICPVYEGFALHH 177
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 120 bits (290), Expect = 6e-28
Identities = 64/152 (42%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Frame = +1
Query: 79 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 222
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 223 GQKDSYVGDEASSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 399
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 400 EAPLNPKANREKMTQIMFETFNTPAMYVAIQA 495
E PLN NRE +IMFE+FN P +Y+A+QA
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQA 152
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/23 (56%), Positives = 20/23 (86%)
Frame = +3
Query: 525 TGIVLDSGDGVSHTVPIYEGYAL 593
TG+V+DSGDGV+H +P+ +GY +
Sbjct: 171 TGLVIDSGDGVTHCIPVADGYVI 193
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 78.2 bits (184), Expect = 4e-15
Identities = 47/150 (31%), Positives = 79/150 (52%), Gaps = 17/150 (11%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP---------RHQGVMVGMG----- 225
+EV+ LV D GS + GFAG++ P+ PS + + + + G
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 226 --QKDSYVGD-EASSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 396
+K+ ++G + R ++ ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 397 TEAPLNPKANREKMTQIMFETFNTPAMYVA 486
+E+ N +A REK+T+IMFE F PA Y++
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLS 158
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
A GRT G+++DSG + VP+++GYA+ HA
Sbjct: 167 AQGRTHGLMVDSGATQTSVVPVFDGYAVTHA 197
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.6 bits (118), Expect = 4e-07
Identities = 35/123 (28%), Positives = 59/123 (47%)
Frame = +1
Query: 94 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGI 273
+ ++ DNG K G ++PR V SIV + +H+ V + + +E S K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 274 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 453
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 454 ETF 462
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.6 bits (118), Expect = 4e-07
Identities = 35/123 (28%), Positives = 59/123 (47%)
Frame = +1
Query: 94 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGI 273
+ ++ DNG K G ++PR V SIV + +H+ V + + +E S K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 274 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 453
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 454 ETF 462
+ F
Sbjct: 116 DYF 118
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 34.7 bits (76), Expect = 0.051
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +3
Query: 174 PLDRGKAPPSGRDGRYGTEGLLCRR*GQ*QKRYPDPQIPHRTRNRH*LG*HGEDLASYLL 353
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 354 Q*AACRPRGTPSPAH*GSPQPQG 422
A P G P PA G+P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 33.1 bits (72), Expect = 0.16
Identities = 28/79 (35%), Positives = 32/79 (40%)
Frame = +3
Query: 186 GKAPPSGRDGRYGTEGLLCRR*GQ*QKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AA 365
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 366 CRPRGTPSPAH*GSPQPQG 422
P G P PA G+P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 0.21
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -3
Query: 407 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLLASSPT*ESF 228
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 227 CPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 84
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 363 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 488
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 158 ASSPAKPALHIPEPLSTTNAATSS 87
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 363 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 488
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 158 ASSPAKPALHIPEPLSTTNAATSS 87
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 363 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 488
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 158 ASSPAKPALHIPEPLSTTNAATSS 87
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 363 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 488
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 158 ASSPAKPALHIPEPLSTTNAATSS 87
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 133 KAGFAGDDAPRAVFPSIVGRPRHQG 207
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024753-2|AAF60457.2| 561|Caenorhabditis elegans Hypothetical
protein Y23H5B.5 protein.
Length = 561
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -2
Query: 354 VEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFATGLISYIRVLLSHTDHHALMAG 193
++GM+ N H + +F G F ++ T ++SY+RV++ H +AG
Sbjct: 383 IDGMLSNFKHAAVIK--LLFGGKFR---SAMDTAVVSYLRVIVMRGAIHRALAG 431
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3
Query: 183 RGKAPPSGRDGRYGTEG 233
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,413,048
Number of Sequences: 27780
Number of extensions: 363389
Number of successful extensions: 1491
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1482
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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