Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0648
(604 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 274 2e-74
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 274 3e-74
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 274 3e-74
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 272 9e-74
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 272 2e-73
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 272 2e-73
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 268 3e-72
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 268 3e-72
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 268 3e-72
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 248 2e-66
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 200 4e-52
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 169 1e-42
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 144 3e-35
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 114 5e-26
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 109 1e-24
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 104 5e-23
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 76 2e-14
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 72 3e-13
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 69 2e-12
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.083
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.4
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 29 1.8
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 29 3.1
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.1
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.2
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.6
At2g44130.1 68415.m05489 kelch repeat-containing F-box family pr... 27 9.6
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 9.6
At1g28630.1 68414.m03526 expressed protein ; expression supporte... 27 9.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 274 bits (673), Expect = 2e-74
Identities = 125/136 (91%), Positives = 130/136 (95%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFNTPAMYVAIQA
Sbjct: 125 MFETFNTPAMYVAIQA 140
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 274 bits (672), Expect = 3e-74
Identities = 125/136 (91%), Positives = 129/136 (94%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFNTPAMYVAIQA
Sbjct: 125 MFETFNTPAMYVAIQA 140
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 274 bits (672), Expect = 3e-74
Identities = 125/136 (91%), Positives = 129/136 (94%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFNTPAMYVAIQA
Sbjct: 125 MFETFNTPAMYVAIQA 140
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 272 bits (668), Expect = 9e-74
Identities = 124/136 (91%), Positives = 129/136 (94%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFN PAMYVAIQA
Sbjct: 125 MFETFNVPAMYVAIQA 140
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 272 bits (666), Expect = 2e-73
Identities = 123/136 (90%), Positives = 128/136 (94%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFN PAMYVAIQA
Sbjct: 125 MFETFNAPAMYVAIQA 140
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 272 bits (666), Expect = 2e-73
Identities = 123/136 (90%), Positives = 128/136 (94%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA SKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFN PAMYVAIQA
Sbjct: 125 MFETFNAPAMYVAIQA 140
Score = 69.7 bits (163), Expect = 1e-12
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 176
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 268 bits (656), Expect = 3e-72
Identities = 118/136 (86%), Positives = 129/136 (94%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA SKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFN+PAMYVAIQA
Sbjct: 125 MFETFNSPAMYVAIQA 140
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEG++LPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGFSLPHA 176
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 268 bits (656), Expect = 3e-72
Identities = 118/136 (86%), Positives = 129/136 (94%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA SKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFN+PAMYVAIQA
Sbjct: 125 MFETFNSPAMYVAIQA 140
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEG++LPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGFSLPHA 176
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 268 bits (656), Expect = 3e-72
Identities = 118/136 (86%), Positives = 129/136 (94%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA SKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 448 MFETFNTPAMYVAIQA 495
MFETFN+PAMYVAIQA
Sbjct: 125 MFETFNSPAMYVAIQA 140
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTGIVLDSGDGVSHTVPIYEG++LPHA
Sbjct: 146 ASGRTTGIVLDSGDGVSHTVPIYEGFSLPHA 176
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 248 bits (608), Expect = 2e-66
Identities = 107/136 (78%), Positives = 125/136 (91%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKR 267
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEA ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 268 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 447
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 448 MFETFNTPAMYVAIQA 495
MFE+F P+MY+ IQA
Sbjct: 126 MFESFAFPSMYIGIQA 141
Score = 68.5 bits (160), Expect = 3e-12
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
+SGRTTGIVLDSGDGVSHTVPIYEGYALPHA
Sbjct: 147 SSGRTTGIVLDSGDGVSHTVPIYEGYALPHA 177
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 200 bits (489), Expect = 4e-52
Identities = 91/131 (69%), Positives = 107/131 (81%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGILTL 282
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 283 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 462
K P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 463 NTPAMYVAIQA 495
+ PAMYV++Q+
Sbjct: 119 DVPAMYVSMQS 129
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPH 599
+SGRTTG+VLD G+ VSHTVP+YEGYALPH
Sbjct: 135 SSGRTTGVVLDLGERVSHTVPVYEGYALPH 164
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 169 bits (411), Expect = 1e-42
Identities = 72/95 (75%), Positives = 86/95 (90%)
Frame = +1
Query: 211 MVGMGQKDSYVGDEASSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 390
MVGM + D +VGD+A ++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 391 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 495
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQA 95
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
ASGRTTG VLDSGDGVS+ VPIYEG ALPHA
Sbjct: 101 ASGRTTGTVLDSGDGVSYIVPIYEGSALPHA 131
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 144 bits (350), Expect = 3e-35
Identities = 64/133 (48%), Positives = 89/133 (66%), Gaps = 2/133 (1%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEASSKRGIL 276
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ S R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 277 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 456
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 457 TFNTPAMYVAIQA 495
+N +++ IQA
Sbjct: 127 KYNFAGVFIQIQA 139
Score = 48.8 bits (111), Expect = 3e-06
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPH 599
A G TG+V+DSGDGV+H VP+ +GY+ PH
Sbjct: 145 AQGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 114 bits (274), Expect = 5e-26
Identities = 63/155 (40%), Positives = 91/155 (58%), Gaps = 22/155 (14%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 237
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 238 -----------YVGDEASS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 381
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 382 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVA 486
HP+LL E PLN + REK ++MFE + PA+++A
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMA 159
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 510 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 602
A+GR T +V+D G G + P+++GY L A
Sbjct: 168 ATGRATSLVVDCGGGSTTISPVHDGYVLQKA 198
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 109 bits (262), Expect = 1e-24
Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 21/153 (13%)
Frame = +1
Query: 100 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 225
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 226 QKDSYVGDEASSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 396
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 397 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQA 495
TE+PL P +RE +I+FETFN P +Y+A+ +
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNS 157
Score = 37.9 bits (84), Expect = 0.005
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 6/37 (16%)
Frame = +3
Query: 501 LAVASGRTT------GIVLDSGDGVSHTVPIYEGYAL 593
LA+A+G TT G+V+D GDG +H VP+ EGY +
Sbjct: 159 LALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVI 195
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 104 bits (249), Expect = 5e-23
Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 16/132 (12%)
Frame = +1
Query: 88 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 222
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 223 GQKDSYVGDEA-SSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 399
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 400 EAPLNPKANREK 435
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 75.8 bits (178), Expect = 2e-14
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGILTL 282
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 283 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQ 444
+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAE 137
Query: 445 IMFETFNTPAMYVAIQA 495
++FET+ PA+ + A
Sbjct: 138 LLFETYGVPAVAFGVDA 154
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 72.1 bits (169), Expect = 3e-13
Identities = 39/128 (30%), Positives = 66/128 (51%)
Frame = +1
Query: 103 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGILTL 282
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 283 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 462
+ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 463 NTPAMYVA 486
++Y+A
Sbjct: 122 GFSSLYIA 129
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 68.9 bits (161), Expect = 2e-12
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Frame = +1
Query: 100 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGIL 276
ALVVD GS KAG A D +P + PS + R MV G + D ++ +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 277 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 453
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 454 ETFNTPAMYVAIQA 495
ETFN Y + QA
Sbjct: 113 ETFNVSGFYASEQA 126
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.083
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 224 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 87
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 247 DEASSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 426
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 427 REK 435
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 247 DEASSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 426
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 427 REK 435
REK
Sbjct: 225 REK 227
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 327 HVIPVSDDSVFDGVFEGQDTSFATGLISYIRVLLSH 220
HVIPV+ + +F+ QD FA+ ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 335 IFSMSSQLVTIPCSMGYLRVRIPLLLLASS 246
IFS SS+LVT P S+ +R R ++L+ SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 402 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 503
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 200 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 78
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 396 H*GSPQPQGQQREDDPDHVRN 458
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
>At2g44130.1 68415.m05489 kelch repeat-containing F-box family
protein very low similarity to SP|Q9ER30 Kelch-related
protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 409
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/58 (24%), Positives = 23/58 (39%)
Frame = +1
Query: 166 AVFPSIVGRPRHQGVMVGMGQKDSYVGDEASSKRGILTLKYPIEHGIVTNWDDMEKIW 339
+V P GR QG VGMG + + + +G I +W ++ +W
Sbjct: 230 SVTPMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDNVW 287
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 313 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 462
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At1g28630.1 68414.m03526 expressed protein ; expression supported
by MPSS
Length = 321
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 553 PSPESSTIPVVRPDATARARL 491
P PESSTIP + PD + +L
Sbjct: 64 PCPESSTIPQISPDMQQQQQL 84
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,807,374
Number of Sequences: 28952
Number of extensions: 349025
Number of successful extensions: 1116
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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