Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0646
(670 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 177 2e-45
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 176 2e-45
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 176 2e-45
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 99 3e-22
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 90 3e-19
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 78 1e-15
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 38 0.002
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 37 0.002
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.005
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.005
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 36 0.007
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 34 0.016
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 33 0.028
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 31 0.20
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.26
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.46
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 29 0.61
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 28 1.1
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 27 2.4
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 27 2.4
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.2
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 27 3.2
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 26 4.3
SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|c... 26 5.6
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 5.6
SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces p... 25 7.5
SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion cytoch... 25 7.5
SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion ... 25 7.5
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz... 25 7.5
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 25 7.5
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 9.9
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 9.9
SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit |Schizosacc... 25 9.9
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 177 bits (430), Expect = 2e-45
Identities = 88/142 (61%), Positives = 103/142 (72%), Gaps = 3/142 (2%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLA+TLGVKQLIV VNKMD+T + TS + + PF+
Sbjct: 136 HALLAYTLGVKQLIVAVNKMDTT-----GWSQARFEEIVKETSNFIKKVGFNPKTVPFVP 190
Query: 614 GT---GDNMLEPSTKMPWFKGW 670
+ GDNM+EP+T MPW++GW
Sbjct: 191 VSGFQGDNMIEPTTNMPWYQGW 212
Score = 155 bits (375), Expect = 7e-39
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 176 bits (429), Expect = 2e-45
Identities = 87/142 (61%), Positives = 103/142 (72%), Gaps = 3/142 (2%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLA+TLGVKQLIV VNKMD+T + TS + + PF+
Sbjct: 136 HALLAYTLGVKQLIVAVNKMDTT-----GWSQARFEEIVKETSNFIKKVGFNPKTVPFVP 190
Query: 614 GT---GDNMLEPSTKMPWFKGW 670
+ GDNM+EP+T MPW++GW
Sbjct: 191 VSGFQGDNMIEPTTNMPWYQGW 212
Score = 155 bits (375), Expect = 7e-39
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 176 bits (429), Expect = 2e-45
Identities = 87/142 (61%), Positives = 103/142 (72%), Gaps = 3/142 (2%)
Frame = +2
Query: 254 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 433
+LWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFEAGISK+GQTRE
Sbjct: 76 ALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTRE 135
Query: 434 HALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLD 613
HALLA+TLGVKQLIV VNKMD+T + TS + + PF+
Sbjct: 136 HALLAYTLGVKQLIVAVNKMDTT-----GWSQARFEEIVKETSNFIKKVGFNPKTVPFVP 190
Query: 614 GT---GDNMLEPSTKMPWFKGW 670
+ GDNM+EP+T MPW++GW
Sbjct: 191 VSGFQGDNMIEPTTNMPWYQGW 212
Score = 155 bits (375), Expect = 7e-39
Identities = 71/75 (94%), Positives = 73/75 (97%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGKEK HIN+VVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 210 DKLKAERERGITIDI 254
DKLKAERERGITIDI
Sbjct: 61 DKLKAERERGITIDI 75
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 99 bits (238), Expect = 3e-22
Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 445
FET +++DAPGH+ ++ NMI G SQAD VL+++A GEFEAG + GQTREHA+L
Sbjct: 311 FETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVL 370
Query: 446 AFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYPHTSRRLA--TTQLLSLSCPFLDGT 619
A T G+ L+V +NKMD ++ K RR+A ++ P T
Sbjct: 371 ARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYT 430
Query: 620 GDNMLE--PSTKMPWFKG 667
G N+ + S+ PW++G
Sbjct: 431 GQNVKDRVDSSVCPWYQG 448
Score = 87.8 bits (208), Expect = 1e-18
Identities = 37/71 (52%), Positives = 53/71 (74%)
Frame = +3
Query: 42 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 221
K H+NIV IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 222 AERERGITIDI 254
ERE+G T+++
Sbjct: 296 EEREKGKTVEV 306
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 89.8 bits (213), Expect = 3e-19
Identities = 42/77 (54%), Positives = 51/77 (66%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 445
FE+ K I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L
Sbjct: 250 FESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYL 309
Query: 446 AFTLGVKQLIVGVNKMD 496
LG+ +++V VNK+D
Sbjct: 310 LRALGISEIVVSVNKLD 326
Score = 85.0 bits (201), Expect = 9e-18
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = +3
Query: 42 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 221
K +++VV GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 222 AERERGITIDILS 260
ER RG+T+D+ S
Sbjct: 235 EERARGVTMDVAS 247
Score = 36.3 bits (80), Expect = 0.004
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 508 TYSEPRFEEIKKEVSSY-IKKIGYNPTAVAFVPIS 609
++SE RF+EIK VS + IK +G+ + V FVPIS
Sbjct: 329 SWSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPIS 363
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 77.8 bits (183), Expect = 1e-15
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +2
Query: 263 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 442
++ET+ + +D PGH D+IKNMITG + D A+++V+A G+ QTREH L
Sbjct: 110 EYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP-------QTREHLL 162
Query: 443 LAFTLGVKQLIVGVNKMDSTEPHTV 517
LA +GVKQ++V +NK+D EP +
Sbjct: 163 LARQVGVKQIVVYINKVDMVEPDMI 187
Score = 39.9 bits (89), Expect = 3e-04
Identities = 27/71 (38%), Positives = 36/71 (50%)
Frame = +3
Query: 36 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 215
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 216 LKAERERGITI 248
E+ RGITI
Sbjct: 94 APEEKARGITI 104
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 37.5 bits (83), Expect = 0.002
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -1
Query: 421 TVLRDTSFEFTGTGSYDEHSAISLRGSCDHVL--DEIS--VSRSINDGNIVLASFELPER 254
+V+ +T T ++ + +SL SC L DE S SRS N + ++
Sbjct: 109 SVMNETDSSSTSVEDVNKENILSLNDSCLIKLSDDEASNKSSRSSTPRNSIKSNSSNQGH 168
Query: 253 ISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 119
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 169 GDIPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 284 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 463
+V+ +D PGH + M+ G + D A+L++A QT EH + +
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162
Query: 464 KQLIVGVNKMD 496
K +I+ NK+D
Sbjct: 163 KHIIILQNKVD 173
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +3
Query: 24 PKMGKEKTHINIVVIGHVDSGKST 95
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.9 bits (79), Expect = 0.005
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGK N+ VI HVD GKST T L+ K G I A + G F +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGII----------SAAKAGDARF-----M 57
Query: 210 DKLKAERERGITI 248
D E+ERG+TI
Sbjct: 58 DTRADEQERGVTI 70
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 281 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 376
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.9 bits (79), Expect = 0.005
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = +3
Query: 30 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 209
MGK N+ VI HVD GKST T L+ K G I A + G F +
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGII----------SAAKAGDARF-----M 57
Query: 210 DKLKAERERGITI 248
D E+ERG+TI
Sbjct: 58 DTRADEQERGVTI 70
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 281 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 376
+ V +ID+PGH DF + D A+++V
Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 35.5 bits (78), Expect = 0.007
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
NI + H+DSGK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 234 RGITI 248
+GITI
Sbjct: 111 KGITI 115
Score = 34.3 bits (75), Expect = 0.016
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 436
FE S Y + IID PGH DF + D AVL++ A +G I+ + Q R +
Sbjct: 141 FEKS-YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 34.3 bits (75), Expect = 0.016
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
N+ +I H+D+GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGD----TVMDYLPAERQ 76
Query: 234 RGITID 251
RGITI+
Sbjct: 77 RGITIN 82
Score = 29.1 bits (62), Expect = 0.61
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 287 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 466
+ +ID PGH DF + + D AV I+ + AG+ QT+ A G+
Sbjct: 95 INLIDTPGHADFTFEVERSVAVLDGAVAII-----DGSAGV--EAQTKVVWKQATKRGIP 147
Query: 467 QLIVGVNKMD 496
++I VNKMD
Sbjct: 148 KVIF-VNKMD 156
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 33.5 bits (73), Expect = 0.028
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 266 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
F+ ++T +D PGH F G + AD VL+VA G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 30.7 bits (66), Expect = 0.20
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +2
Query: 257 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
++ + Y + +ID PGH DF ++ + + +L+V A G
Sbjct: 116 IYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
Score = 29.1 bits (62), Expect = 0.61
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +3
Query: 54 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 233
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 234 RGITI 248
RGIT+
Sbjct: 104 RGITV 108
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 30.3 bits (65), Expect = 0.26
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 281 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 391
Y + +ID+PGH DF + + + D A ++V A G
Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.46
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 293 IIDAPGHRDFIKNMITGTSQADCAVLIV 376
IID PGH F GTS + A+L++
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 29.1 bits (62), Expect = 0.61
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Frame = +2
Query: 356 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRK 535
D L V+ G +NGQ EH+L LGV +I + DS E + + K
Sbjct: 581 DGGTLYVSTNNGYVLMFNFQNGQVIEHSLRRNQLGVAPII--LKHFDSKEKNAIFALGEK 638
Query: 536 SRRKYPHTSRRLAT----TQLLSLSCPFLDGTGDNML 634
+ Y + + + T T++L++S G NML
Sbjct: 639 PQLMYYESDKLVITPLSCTEMLNISSYVNPSLGVNML 675
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = -1
Query: 304 SINDGNIVLASFELPERISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIP 125
S++ + L S+ P +S + A ++YL+ PL S S S + +R SIP
Sbjct: 305 SVDSASTALNSYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSASRHTALRTSIP 364
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 535 FPQIWAHCMWFSGIHFVYSYDE 470
F QIWA C+W+ G + S E
Sbjct: 2065 FQQIWACCLWYWGSYIDRSMQE 2086
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 27.1 bits (57), Expect = 2.4
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = -1
Query: 370 EHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPERISIVIPRSRSAFSLSNTQAYL 191
EH+A+ L S +L IS R N GNI L S + + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 190 KDPLPI 173
K LPI
Sbjct: 62 KALLPI 67
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 296 IDAPGHRDFIKNMITGTSQADCAVLIV 376
ID PGH DF+ + + +D VL+V
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLVV 240
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 26.6 bits (56), Expect = 3.2
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -2
Query: 270 SNFQREYRL*YHAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSNDQWWW 91
SN +R R + V +PK I I++ F P S S C+Y S+D W
Sbjct: 13 SNLRRMNRDHSSNNTNRTVLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWR 72
Query: 90 T 88
T
Sbjct: 73 T 73
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 26.2 bits (55), Expect = 4.3
Identities = 23/93 (24%), Positives = 41/93 (44%)
Frame = +3
Query: 51 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 230
+ +V+ + + + T G KC I + ++ K A + + KY K E
Sbjct: 1042 VTLVLPPKISTKEDTKLGE---KCANIVQLQVDLLSKLADQEKEKHLKYLQSSYKNSLEV 1098
Query: 231 ERGITIDILSGSSKLASTMLPSLMLLDTEISSR 329
+ +DI+ +++ ST L L+DTE SR
Sbjct: 1099 QLA-KLDIVKETNERLSTADSILSLIDTEALSR 1130
>SPBC24C6.08c |||vesicle coat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 367
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +2
Query: 512 TVSPDLRKSRRKYPHTSRRLATTQLL---SLSCPF--LDGTGDNMLEP 640
+ +PD+ ++PHT +R +T + L LSC + L D+M P
Sbjct: 145 STNPDVLYMSSQHPHTQQRYSTLKRLMVRCLSCEYSTLSEASDSMSNP 192
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 237 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 139
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPAC22F8.08 |||COPII vesicle coat protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 25.4 bits (53), Expect = 7.5
Identities = 28/95 (29%), Positives = 37/95 (38%)
Frame = +2
Query: 374 VAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPHTVSPDLRKSRRKYP 553
VA GT E GI NG+ A+ A + + +D P VS KSRR+YP
Sbjct: 47 VAEGTAE---GIVSNGEYAVGAMGAAPTNI------IGSVDQQPP--VSHTSHKSRRQYP 95
Query: 554 HTSRRLATTQLLSLSCPFLDGTGDNMLEPSTKMPW 658
L T S + P L M + P+
Sbjct: 96 AEVFELTNTLAASPAPPSLSEPSYVMARTPSSSPY 130
>SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion
cytochrome c oxidase assembly protein Cox1101,
mitochondrial ribosomal protein
Rsm22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 540 EGSILIHQEDWLQPNCCRFRAHFWMAP 620
+G I E+ ++ N C F+ HF+++P
Sbjct: 326 DGRCPIDIENGVRANICSFKQHFFLSP 352
>SPAC19B12.13 |cox1102|cox11, cox11-b, cox11, SPAPB8E5.01|fusion
cytochrome c oxidase assembly protein Cox1102,
mitochondrial ribosomal protein
Rsm2202|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 540 EGSILIHQEDWLQPNCCRFRAHFWMAP 620
+G I E+ ++ N C F+ HF+++P
Sbjct: 326 DGRCPIDIENGVRANICSFKQHFFLSP 352
>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 255
Score = 25.4 bits (53), Expect = 7.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 526 IWAHCMWFSGIHFVYSYDELFDT 458
+WAH +W SGI D+ DT
Sbjct: 52 LWAHYLWNSGIELANYIDKNPDT 74
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 253 ISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 140
IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 409 ISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 171 PGPPSRTSRWYVCQYHHIC 115
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 25.0 bits (52), Expect = 9.9
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 534 FLKSGLTVCGSVESILFTPTMSCLTPRVKASKACSRV*PF-LEIPASNSPVPAATMSTAQ 358
FLKSG T S ++ F PT P + + V I A+ + + +ATM T
Sbjct: 32 FLKSGNTASSSSPTLQFRPTSR--YPTLSHEPVYTNVLDLSSRIDANRASIMSATMGTPP 89
Query: 357 SA 352
SA
Sbjct: 90 SA 91
>SPBC146.14c |sec26|SPBC337.01c|coatomer beta subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 940
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 334 HVLDEISVSRSINDGNIVLASFELPERISIVIPRSRSAFS 215
+ +D+ SV R +N + + ELPE ++ + R AFS
Sbjct: 607 YTIDDDSVERIMNCIRAIYSFEELPEFQTVFLDDMRKAFS 646
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,866,868
Number of Sequences: 5004
Number of extensions: 60341
Number of successful extensions: 240
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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